37 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nfrkb	Nuclear factor related to kappaB binding protein. (1278 aa)
	ENSKMAP00000000467	TAN domain-containing protein. (123 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (439 aa)
	Atm	Uncharacterized protein. (130 aa)
	ENSKMAP00000001053	Uncharacterized protein. (109 aa)
	mapkapk5	MAPK activated protein kinase 5. (471 aa)
	LOC108241600	Homeobox containing 1a. (347 aa)
	cct3	T-complex protein 1 subunit gamma. (540 aa)
	ppp1r10	Protein phosphatase 1, regulatory subunit 10. (802 aa)
	tfpt	TCF3 (E2A) fusion partner. (197 aa)
	naf1	Uncharacterized protein. (486 aa)
	LOC108242278	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (261 aa)
	LOC108247429	Uncharacterized protein. (1905 aa)
	pot1	Protection of telomeres 1 homolog. (770 aa)
	atrx	ATRX chromatin remodeler. (2228 aa)
	sirt6	Sirtuin 6. (350 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (536 aa)
	dkc1	Dyskeratosis congenita 1, dyskerin. (497 aa)
	ino80e	INO80 complex subunit E. (250 aa)
	rad50	RAD50 homolog, double strand break repair protein. (1312 aa)
	ENSKMAP00000013709	Uncharacterized protein. (437 aa)
	LOC108234987	Poly [ADP-ribose] polymerase. (1267 aa)
	xrcc5	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (725 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	fbxo4	F-box protein 4. (395 aa)
	LOC108232644	Poly [ADP-ribose] polymerase. (1288 aa)
	cct5	Chaperonin containing TCP1, subunit 5 (epsilon). (541 aa)
	ino80d	INO80 complex subunit Da. (1000 aa)
	mcrs1	Microspherule protein 1. (466 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1590 aa)
	Nek2	NIMA-related kinase 2. (492 aa)
	terf2	HTH myb-type domain-containing protein. (603 aa)
	ino80	INO80 complex ATPase subunit. (1474 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1105 aa)
	slx4	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae). (1695 aa)
	ercc1	Excision repair cross-complementation group 1. (352 aa)
	pnkp	Polynucleotide kinase 3'-phosphatase. (590 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atm	ENSKMAP00000000467	ENSKMAP00000000507	ENSKMAP00000000467	Uncharacterized protein.	TAN domain-containing protein.	0.926
Atm	ENSKMAP00000001053	ENSKMAP00000000507	ENSKMAP00000001053	Uncharacterized protein.	Uncharacterized protein.	0.996
Atm	LOC108242278	ENSKMAP00000000507	ENSKMAP00000007581	Uncharacterized protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.626
Atm	LOC108247429	ENSKMAP00000000507	ENSKMAP00000007790	Uncharacterized protein.	Uncharacterized protein.	0.401
Atm	atrx	ENSKMAP00000000507	ENSKMAP00000008603	Uncharacterized protein.	ATRX chromatin remodeler.	0.401
Atm	ercc1	ENSKMAP00000000507	ENSKMAP00000027419	Uncharacterized protein.	Excision repair cross-complementation group 1.	0.594
Atm	rad50	ENSKMAP00000000507	ENSKMAP00000012919	Uncharacterized protein.	RAD50 homolog, double strand break repair protein.	0.994
Atm	slx4	ENSKMAP00000000507	ENSKMAP00000026597	Uncharacterized protein.	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).	0.613
Atm	uchl5	ENSKMAP00000000507	ENSKMAP00000016234	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.406
Atm	xrcc5	ENSKMAP00000000507	ENSKMAP00000015947	Uncharacterized protein.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.891
ENSKMAP00000000467	Atm	ENSKMAP00000000467	ENSKMAP00000000507	TAN domain-containing protein.	Uncharacterized protein.	0.926
ENSKMAP00000000467	ENSKMAP00000001053	ENSKMAP00000000467	ENSKMAP00000001053	TAN domain-containing protein.	Uncharacterized protein.	0.970
ENSKMAP00000000467	LOC108242278	ENSKMAP00000000467	ENSKMAP00000007581	TAN domain-containing protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.626
ENSKMAP00000000467	LOC108247429	ENSKMAP00000000467	ENSKMAP00000007790	TAN domain-containing protein.	Uncharacterized protein.	0.401
ENSKMAP00000000467	atrx	ENSKMAP00000000467	ENSKMAP00000008603	TAN domain-containing protein.	ATRX chromatin remodeler.	0.401
ENSKMAP00000000467	ercc1	ENSKMAP00000000467	ENSKMAP00000027419	TAN domain-containing protein.	Excision repair cross-complementation group 1.	0.594
ENSKMAP00000000467	rad50	ENSKMAP00000000467	ENSKMAP00000012919	TAN domain-containing protein.	RAD50 homolog, double strand break repair protein.	0.948
ENSKMAP00000000467	slx4	ENSKMAP00000000467	ENSKMAP00000026597	TAN domain-containing protein.	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).	0.613
ENSKMAP00000000467	uchl5	ENSKMAP00000000467	ENSKMAP00000016234	TAN domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.406
ENSKMAP00000000467	xrcc5	ENSKMAP00000000467	ENSKMAP00000015947	TAN domain-containing protein.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.891