68 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ect2	Epithelial cell transforming 2. (1050 aa)
	LOC108233748	Cell division cycle 14B. (525 aa)
	LOC108239830	Uncharacterized protein. (629 aa)
	KIF23	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (946 aa)
	bbs4	Bardet-Biedl syndrome 4. (545 aa)
	LOC108240497	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	ENSKMAP00000003712	Si:ch1073-416j23.1. (501 aa)
	klhl21	Kelch-like family member 21. (611 aa)
	cxcr5	Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. (357 aa)
	cdc6	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (575 aa)
	LOC108235159	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (780 aa)
	plk4	Polo-like kinase 4 (Drosophila). (931 aa)
	flcn	Folliculin. (555 aa)
	LOC108248645	Cell division cycle 42. (191 aa)
	racgap1	Rac GTPase activating protein 1. (598 aa)
	cdc14a	Cell division cycle 14Ab. (595 aa)
	LOC108235002	Citron rho-interacting serine/threonine kinase b. (1632 aa)
	ENSKMAP00000009331	Uncharacterized protein. (61 aa)
	LOC108234310	GIPC PDZ domain containing family, member 3. (329 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1037 aa)
	brca2	BRCA2 DNA repair associated. (2641 aa)
	CDC42	Cell division cycle 42. (197 aa)
	cspp1	Uncharacterized protein. (860 aa)
	LOC108235453	Uncharacterized protein. (197 aa)
	LOC108235454	Uncharacterized protein. (190 aa)
	kif20b	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1625 aa)
	pin1	Peptidyl-prolyl cis-trans isomerase. (156 aa)
	ENSKMAP00000011951	HP domain-containing protein. (72 aa)
	PLK1	Serine/threonine-protein kinase PLK. (582 aa)
	klhl13	Kelch-like family member 13. (664 aa)
	drd3	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (457 aa)
	Map10	Si:ch1073-266p11.2. (754 aa)
	uvrag	UV radiation resistance associated gene. (728 aa)
	plk3	Serine/threonine-protein kinase PLK. (678 aa)
	cenpv	Centromere protein V. (206 aa)
	pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3. (885 aa)
	myo19	Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (898 aa)
	ankrd53	ANK_REP_REGION domain-containing protein. (388 aa)
	rab11fip3	RAB11 family interacting protein 3 (class II). (1081 aa)
	prpf40a	PRP40 pre-mRNA processing factor 40 homolog A. (879 aa)
	aurka	Aurora kinase A; Belongs to the protein kinase superfamily. (424 aa)
	gipc1	GIPC PDZ domain containing family, member 1. (337 aa)
	birc6	Baculoviral IAP repeat containing 6. (4869 aa)
	setd2	SET domain containing 2, histone lysine methyltransferase. (2591 aa)
	LOC108249454	RAB11 family interacting protein 4 (class II) a. (580 aa)
	prc1	Protein regulator of cytokinesis 1b. (566 aa)
	plk2	Serine/threonine-protein kinase PLK. (657 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (375 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (426 aa)
	zfyve26	Zinc finger, FYVE domain containing 26. (2585 aa)
	ENSKMAP00000022754	HP domain-containing protein. (676 aa)
	kif20a	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (900 aa)
	ccp110	Uncharacterized protein. (836 aa)
	LOC108231213	Aurora kinase B; Belongs to the protein kinase superfamily. (332 aa)
	gipc2	GIPC PDZ domain containing family, member 2. (366 aa)
	becn1	Beclin 1, autophagy related. (447 aa)
	LOC108242678	Uncharacterized protein. (204 aa)
	ahctf1	AT hook containing transcription factor 1. (1209 aa)
	LOC108239854	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2027 aa)
	LOC108230197	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (891 aa)
	e2f8	E2F transcription factor 8. (864 aa)
	LOC108248863	Supervillin d. (1490 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC108244970	E2F transcription factor 7. (615 aa)
	incenp	Uncharacterized protein. (754 aa)
	LOC108229871	Protein regulator of cytokinesis 1a. (597 aa)
	KLHL34	Kelch like family member 34. (593 aa)
	rab11fip4	RAB11 family interacting protein 4 (class II) b. (507 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSKMAP00000003712	ENSKMAP00000010448	ENSKMAP00000003712	Cell division cycle 42.	Si:ch1073-416j23.1.	0.700
CDC42	LOC108239830	ENSKMAP00000010448	ENSKMAP00000000652	Cell division cycle 42.	Uncharacterized protein.	0.700
CDC42	ect2	ENSKMAP00000010448	ENSKMAP00000016675	Cell division cycle 42.	Epithelial cell transforming 2.	0.692
CDC42	racgap1	ENSKMAP00000010448	ENSKMAP00000007496	Cell division cycle 42.	Rac GTPase activating protein 1.	0.700
CUL3	KLHL34	ENSKMAP00000027871	ENSKMAP00000029085	Cullin 3; Belongs to the cullin family.	Kelch like family member 34.	0.651
CUL3	LOC108231213	ENSKMAP00000027871	ENSKMAP00000025778	Cullin 3; Belongs to the cullin family.	Aurora kinase B; Belongs to the protein kinase superfamily.	0.637
CUL3	LOC108240497	ENSKMAP00000027871	ENSKMAP00000002393	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.900
CUL3	PLK1	ENSKMAP00000027871	ENSKMAP00000012277	Cullin 3; Belongs to the cullin family.	Serine/threonine-protein kinase PLK.	0.527
CUL3	aurka	ENSKMAP00000027871	ENSKMAP00000017471	Cullin 3; Belongs to the cullin family.	Aurora kinase A; Belongs to the protein kinase superfamily.	0.637
CUL3	birc6	ENSKMAP00000027871	ENSKMAP00000018194	Cullin 3; Belongs to the cullin family.	Baculoviral IAP repeat containing 6.	0.568
CUL3	klhl13	ENSKMAP00000027871	ENSKMAP00000012826	Cullin 3; Belongs to the cullin family.	Kelch-like family member 13.	0.651
CUL3	klhl21	ENSKMAP00000027871	ENSKMAP00000003897	Cullin 3; Belongs to the cullin family.	Kelch-like family member 21.	0.786
CUL3	plk2	ENSKMAP00000027871	ENSKMAP00000020077	Cullin 3; Belongs to the cullin family.	Serine/threonine-protein kinase PLK.	0.527
CUL3	plk3	ENSKMAP00000027871	ENSKMAP00000014532	Cullin 3; Belongs to the cullin family.	Serine/threonine-protein kinase PLK.	0.527
CUL3	plk4	ENSKMAP00000027871	ENSKMAP00000006605	Cullin 3; Belongs to the cullin family.	Polo-like kinase 4 (Drosophila).	0.470
ENSKMAP00000003712	CDC42	ENSKMAP00000003712	ENSKMAP00000010448	Si:ch1073-416j23.1.	Cell division cycle 42.	0.700
ENSKMAP00000003712	KIF23	ENSKMAP00000003712	ENSKMAP00000001006	Si:ch1073-416j23.1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.940
ENSKMAP00000003712	LOC108229871	ENSKMAP00000003712	ENSKMAP00000029071	Si:ch1073-416j23.1.	Protein regulator of cytokinesis 1a.	0.711
ENSKMAP00000003712	LOC108230197	ENSKMAP00000003712	ENSKMAP00000027098	Si:ch1073-416j23.1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.940
ENSKMAP00000003712	LOC108231213	ENSKMAP00000003712	ENSKMAP00000025778	Si:ch1073-416j23.1.	Aurora kinase B; Belongs to the protein kinase superfamily.	0.565