32 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ccnt1	Cyclin T1; Belongs to the cyclin family. (699 aa)
	ENSKMAP00000017863	Cyclin T2b. (410 aa)
	gtf2f1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
	cdk12	Cyclin-dependent kinase 12. (1356 aa)
	ercc6	Excision repair cross-complementation group 6. (1442 aa)
	supt6h	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1751 aa)
	ell2	Elongation factor, RNA polymerase II, 2. (656 aa)
	ccnt2	Cyclin T2; Belongs to the cyclin family. (718 aa)
	ENSKMAP00000017834	CYCLIN domain-containing protein; Belongs to the cyclin family. (186 aa)
	cdk13	Cyclin-dependent kinase 13. (1417 aa)
	LOC108237395	Uncharacterized protein. (600 aa)
	LOC108230127	Si:ch211-13k12.2. (601 aa)
	LOC108244843	Zgc:154006. (564 aa)
	ENSKMAP00000020706	Chromo domain-containing protein. (60 aa)
	LOC108241331	Bromodomain containing 4. (1516 aa)
	LOC108238350	Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (537 aa)
	thoc5	THO complex 5. (684 aa)
	leo1	LEO1 homolog, Paf1/RNA polymerase II complex component. (600 aa)
	ccnk	Cyclin K; Belongs to the cyclin family. (542 aa)
	ell	Elongation factor RNA polymerase II. (624 aa)
	thoc1	THO complex 1. (653 aa)
	supt5h	Transcription elongation factor SPT5. (1049 aa)
	supt16h	SPT16 homolog, facilitates chromatin remodeling subunit. (1030 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
	ENSKMAP00000008779	Chromobox homolog 7b. (144 aa)
	ENSKMAP00000002361	PWWP domain-containing protein. (145 aa)
	pwwp2a	Uncharacterized protein. (576 aa)
	eapp	E2f-associated phosphoprotein. (295 aa)
	LOC108230475	Uncharacterized protein. (1443 aa)
	pwwp2b	PWWP domain containing 2B. (616 aa)
	LOC108235683	Uncharacterized protein. (623 aa)
	supt4h1	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000002361	pwwp2a	ENSKMAP00000002361	ENSKMAP00000002328	PWWP domain-containing protein.	Uncharacterized protein.	0.898
ENSKMAP00000017834	ENSKMAP00000017863	ENSKMAP00000017834	ENSKMAP00000017863	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin T2b.	0.900
ENSKMAP00000017834	LOC108230127	ENSKMAP00000017834	ENSKMAP00000021733	CYCLIN domain-containing protein; Belongs to the cyclin family.	Si:ch211-13k12.2.	0.558
ENSKMAP00000017834	LOC108235683	ENSKMAP00000017834	ENSKMAP00000017255	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.558
ENSKMAP00000017834	LOC108237395	ENSKMAP00000017834	ENSKMAP00000022956	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.558
ENSKMAP00000017834	ccnk	ENSKMAP00000017834	ENSKMAP00000003869	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin K; Belongs to the cyclin family.	0.617
ENSKMAP00000017834	cdk12	ENSKMAP00000017834	ENSKMAP00000027729	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 12.	0.806
ENSKMAP00000017834	cdk13	ENSKMAP00000017834	ENSKMAP00000024468	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 13.	0.806
ENSKMAP00000017834	ell	ENSKMAP00000017834	ENSKMAP00000003890	CYCLIN domain-containing protein; Belongs to the cyclin family.	Elongation factor RNA polymerase II.	0.754
ENSKMAP00000017834	ell2	ENSKMAP00000017834	ENSKMAP00000025831	CYCLIN domain-containing protein; Belongs to the cyclin family.	Elongation factor, RNA polymerase II, 2.	0.662
ENSKMAP00000017834	gtf2f1	ENSKMAP00000017834	ENSKMAP00000001405	CYCLIN domain-containing protein; Belongs to the cyclin family.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.573
ENSKMAP00000017834	leo1	ENSKMAP00000017834	ENSKMAP00000002496	CYCLIN domain-containing protein; Belongs to the cyclin family.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.511
ENSKMAP00000017834	supt16h	ENSKMAP00000017834	ENSKMAP00000005995	CYCLIN domain-containing protein; Belongs to the cyclin family.	SPT16 homolog, facilitates chromatin remodeling subunit.	0.537
ENSKMAP00000017834	supt4h1	ENSKMAP00000017834	ENSKMAP00000017600	CYCLIN domain-containing protein; Belongs to the cyclin family.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.679
ENSKMAP00000017834	supt5h	ENSKMAP00000017834	ENSKMAP00000005883	CYCLIN domain-containing protein; Belongs to the cyclin family.	Transcription elongation factor SPT5.	0.721
ENSKMAP00000017863	ENSKMAP00000017834	ENSKMAP00000017863	ENSKMAP00000017834	Cyclin T2b.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.900
ENSKMAP00000017863	LOC108230127	ENSKMAP00000017863	ENSKMAP00000021733	Cyclin T2b.	Si:ch211-13k12.2.	0.558
ENSKMAP00000017863	LOC108235683	ENSKMAP00000017863	ENSKMAP00000017255	Cyclin T2b.	Uncharacterized protein.	0.558
ENSKMAP00000017863	LOC108237395	ENSKMAP00000017863	ENSKMAP00000022956	Cyclin T2b.	Uncharacterized protein.	0.558
ENSKMAP00000017863	ccnk	ENSKMAP00000017863	ENSKMAP00000003869	Cyclin T2b.	Cyclin K; Belongs to the cyclin family.	0.617