STRINGSTRING
ppargc1b ppargc1b tnfaip3 tnfaip3 LOC108250251 LOC108250251 fxn fxn ENSKMAP00000000220 ENSKMAP00000000220 ENSKMAP00000000213 ENSKMAP00000000213 sod3 sod3 aifm1 aifm1 LOC108242980 LOC108242980 park7 park7 LOC108233868 LOC108233868 LOC108240736 LOC108240736 ankzf1 ankzf1 ect2 ect2 LOC108230000 LOC108230000 ncf1 ncf1 ENSKMAP00000018989 ENSKMAP00000018989 oser1 oser1 ripk1 ripk1 LOC108228382 LOC108228382 sod2 sod2 smpd3 smpd3 nfe2l2 nfe2l2 LOC108247157 LOC108247157 mapk7 mapk7 prdx3 prdx3 ccs ccs prdx2 prdx2 ENSKMAP00000011188 ENSKMAP00000011188 sirt1 sirt1 trpa1 trpa1 LOC108242869 LOC108242869 LOC108238211 LOC108238211 LOC108250397 LOC108250397 romo1 romo1 znf277 znf277 LOC108240588 LOC108240588 impact impact mapk1 mapk1 LOC108248610 LOC108248610 sod1 sod1 LOC108241647 LOC108241647 LOC108241711 LOC108241711 pjvk pjvk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppargc1bPeroxisome proliferator-activated receptor gamma, coactivator 1 beta. (904 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (819 aa)
LOC108250251Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (393 aa)
fxnFrataxin. (214 aa)
ENSKMAP00000000220Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (525 aa)
ENSKMAP00000000213Cytochrome P450, family 1, subfamily C, polypeptide 2; Belongs to the cytochrome P450 family. (524 aa)
sod3Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (216 aa)
aifm1Apoptosis inducing factor mitochondrion associated 1. (650 aa)
LOC108242980Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (408 aa)
park7Parkinson protein 7. (189 aa)
LOC108233868Lysine (K)-specific demethylase 6B, b. (1745 aa)
LOC108240736NME/NM23 family member 8; Belongs to the NDK family. (591 aa)
ankzf1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (761 aa)
ect2Epithelial cell transforming 2. (1050 aa)
LOC108230000Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (353 aa)
ncf1Neutrophil cytosolic factor 1. (416 aa)
ENSKMAP00000018989Uncharacterized protein. (152 aa)
oser1Oxidative stress responsive serine-rich 1. (338 aa)
ripk1Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (680 aa)
LOC108228382JunE proto-oncogene, AP-1 transcription factor subunit. (332 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (225 aa)
smpd3Sphingomyelin phosphodiesterase 3, neutral. (722 aa)
nfe2l2Nuclear factor, erythroid 2-like 2a. (613 aa)
LOC108247157Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (621 aa)
mapk7Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (1108 aa)
prdx3Peroxiredoxin 3. (238 aa)
ccsCopper chaperone for superoxide dismutase. (305 aa)
prdx2Peroxiredoxin 2. (197 aa)
ENSKMAP00000011188Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
sirt1Sirtuin 1. (693 aa)
trpa1Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family. (1118 aa)
LOC108242869Lysine (K)-specific demethylase 6B, a. (2244 aa)
LOC108238211Peroxiredoxin 1. (198 aa)
LOC108250397Endothelin 1. (163 aa)
romo1Reactive oxygen species modulator 1. (79 aa)
znf277Zinc finger protein 277. (439 aa)
LOC108240588Mitogen-activated protein kinase. (420 aa)
impactImpact RWD domain protein. (319 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
LOC108248610Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. (493 aa)
sod1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (154 aa)
LOC108241647Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
LOC108241711Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (256 aa)
pjvkPejvakin. (352 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.