4 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
	pold4	Uncharacterized protein. (110 aa)
	pold1	DNA polymerase. (1105 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (440 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
pold1	pold2	ENSKMAP00000013397	ENSKMAP00000003731	DNA polymerase.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.999
pold1	pold3	ENSKMAP00000013397	ENSKMAP00000022542	DNA polymerase.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.998
pold1	pold4	ENSKMAP00000013397	ENSKMAP00000010277	DNA polymerase.	Uncharacterized protein.	0.998
pold2	pold1	ENSKMAP00000003731	ENSKMAP00000013397	Polymerase (DNA directed), delta 2, regulatory subunit.	DNA polymerase.	0.999
pold2	pold3	ENSKMAP00000003731	ENSKMAP00000022542	Polymerase (DNA directed), delta 2, regulatory subunit.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.998
pold2	pold4	ENSKMAP00000003731	ENSKMAP00000010277	Polymerase (DNA directed), delta 2, regulatory subunit.	Uncharacterized protein.	0.998
pold3	pold1	ENSKMAP00000022542	ENSKMAP00000013397	Polymerase (DNA-directed), delta 3, accessory subunit.	DNA polymerase.	0.998
pold3	pold2	ENSKMAP00000022542	ENSKMAP00000003731	Polymerase (DNA-directed), delta 3, accessory subunit.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.998
pold3	pold4	ENSKMAP00000022542	ENSKMAP00000010277	Polymerase (DNA-directed), delta 3, accessory subunit.	Uncharacterized protein.	0.900
pold4	pold1	ENSKMAP00000010277	ENSKMAP00000013397	Uncharacterized protein.	DNA polymerase.	0.998
pold4	pold2	ENSKMAP00000010277	ENSKMAP00000003731	Uncharacterized protein.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.998
pold4	pold3	ENSKMAP00000010277	ENSKMAP00000022542	Uncharacterized protein.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.900