STRINGSTRING
LOC108248752 LOC108248752 cxadr cxadr fgfrl1 fgfrl1 fermt2 fermt2 scn1b scn1b flot2 flot2 LOC108247596 LOC108247596 jam3 jam3 CDH2 CDH2 LOC108246957 LOC108246957 vcl vcl afdn afdn gja5 gja5 LOC108234096 LOC108234096 nrap nrap LOC108236365 LOC108236365 ctnnb1 ctnnb1 LOC108232297 LOC108232297 LOC108242616 LOC108242616 LOC108235422 LOC108235422 LOC108242922 LOC108242922 LOC108229593 LOC108229593 FGFRL1 FGFRL1 LOC108245667 LOC108245667 nectin1 nectin1 ajap1 ajap1 LOC108240485 LOC108240485
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108248752Junctional adhesion molecule 3b. (311 aa)
cxadrCXADR Ig-like cell adhesion molecule. (375 aa)
fgfrl1Fibroblast growth factor receptor like 1a. (506 aa)
fermt2Fermitin family member 2. (696 aa)
scn1bSodium channel, voltage-gated, type I, beta b. (226 aa)
flot2Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (444 aa)
LOC108247596Sodium channel, voltage-gated, type IV, beta b. (212 aa)
jam3Junctional adhesion molecule 3a. (306 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (904 aa)
LOC108246957Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (913 aa)
vclVinculin b. (1066 aa)
afdnAfadin, adherens junction formation factor a. (1916 aa)
gja5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (377 aa)
LOC108234096Vinculin a. (1135 aa)
nrapNebulin-related anchoring protein. (1667 aa)
LOC108236365Junction plakoglobin a. (725 aa)
ctnnb1Catenin (cadherin-associated protein), beta 1. (783 aa)
LOC108232297FXYD domain-containing ion transport regulator; Belongs to the FXYD family. (88 aa)
LOC108242616Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (424 aa)
LOC108235422Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (427 aa)
LOC108242922Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (390 aa)
LOC108229593Sodium channel, voltage-gated, type I, beta a. (214 aa)
FGFRL1Fibroblast growth factor receptor like 1. (506 aa)
LOC108245667Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (388 aa)
nectin1Nectin cell adhesion molecule 1b. (497 aa)
ajap1Adherens junctions associated protein 1. (385 aa)
LOC108240485Sodium channel, voltage-gated, type IV, beta a. (237 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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