STRINGSTRING
pdgfra pdgfra nrp1 nrp1 LOC108242048 LOC108242048 LOC108238578 LOC108238578 abl2 abl2 sgpl1 sgpl1 pdgfd pdgfd flt3 flt3 LOC108249281 LOC108249281 abl1 abl1 pdgfc pdgfc cspg4 cspg4 LOC108237947 LOC108237947 LOC108232032 LOC108232032 LOC108230469 LOC108230469 LOC108232747 LOC108232747 pdgfa pdgfa ston1 ston1 vegfa vegfa pdgfrl pdgfrl smpd3 smpd3 LOC108236096 LOC108236096 txnip txnip LOC108250251 LOC108250251 LOC108230819 LOC108230819 LOC108229415 LOC108229415 zfand5 zfand5 pdgfrb pdgfrb LOC108233628 LOC108233628
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdgfraPlatelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1375 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (919 aa)
LOC108242048Ig-like domain-containing protein. (386 aa)
LOC108238578Cysteine-serine-rich nuclear protein 1a. (577 aa)
abl2Tyrosine-protein kinase. (1203 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)
pdgfdPlatelet derived growth factor d. (333 aa)
flt3Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1004 aa)
LOC108249281Uncharacterized protein. (210 aa)
abl1Tyrosine-protein kinase. (1121 aa)
pdgfcPlatelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family. (345 aa)
cspg4Chondroitin sulfate proteoglycan 4. (2308 aa)
LOC108237947Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (199 aa)
LOC108232032Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (569 aa)
LOC108230469Cysteine-serine-rich nuclear protein 1b. (570 aa)
LOC108232747Uncharacterized protein. (2561 aa)
pdgfaPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (227 aa)
ston1Stonin-1; May be involved in the endocytic machinery. (696 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
pdgfrlPlatelet-derived growth factor receptor-like. (366 aa)
smpd3Sphingomyelin phosphodiesterase 3, neutral. (722 aa)
LOC108236096Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (506 aa)
txnipThioredoxin interacting protein. (400 aa)
LOC108250251Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (393 aa)
LOC108230819Zgc:77486. (218 aa)
LOC108229415Arrestin_C domain-containing protein. (394 aa)
zfand5Zinc finger, AN1-type domain 5a. (208 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1107 aa)
LOC108233628Si:dkey-193c22.2. (2413 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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