STRINGSTRING
LOC108230078 LOC108230078 msx1 msx1 ENSKMAP00000000878 ENSKMAP00000000878 LOC108243287 LOC108243287 LOC108244468 LOC108244468 LOC108243318 LOC108243318 med13 med13 sema6a sema6a LOC108247938 LOC108247938 KCTD15 KCTD15 dicer1 dicer1 leo1 leo1 lef1 lef1 LOC108243308 LOC108243308 rcc2 rcc2 efna1 efna1 sema6b sema6b zfp64 zfp64 LOC108230709 LOC108230709 LOC108231423 LOC108231423 LOC108243445 LOC108243445 pdgfrb pdgfrb ednra ednra LOC108249163 LOC108249163 pdcd6 pdcd6 snai2 snai2 tapt1 tapt1 sema5b sema5b LOC108250397 LOC108250397 hmga2 hmga2 LOC108251637 LOC108251637 LOC108230473 LOC108230473 LOC108230818 LOC108230818 LOC108231368 LOC108231368 TMEM100 TMEM100 SEMA4F SEMA4F sema6d sema6d gdnf gdnf sema4g sema4g LOC108239517 LOC108239517 LOC108251038 LOC108251038 msc msc LOC108239522 LOC108239522 tgfbr3 tgfbr3 LOC108232708 LOC108232708 nrp1 nrp1 LOC108241743 LOC108241743 colec11 colec11 ret ret radil radil fgf2 fgf2 LOC108238201 LOC108238201 LOC108228916 LOC108228916 phox2b phox2b sema4c sema4c tbx1 tbx1 kbtbd8 kbtbd8 LOC108236612 LOC108236612 wdr11 wdr11 htr2b htr2b LOC108246957 LOC108246957 LOC108241363 LOC108241363 LOC108245811 LOC108245811 LOC108245806 LOC108245806 LOC108247541 LOC108247541 LOC108228999 LOC108228999 LOC108244723 LOC108244723 DDX5 DDX5 sema3b sema3b FOXC1 FOXC1 LOC108238182 LOC108238182 sema3g sema3g sema3c sema3c bmp4 bmp4 ENSKMAP00000016136 ENSKMAP00000016136 tcf21 tcf21 LOC108244167 LOC108244167 cep41 cep41 fgf19 fgf19 fgf3 fgf3 LOC108236140 LOC108236140 phactr4 phactr4 LOC108231486 LOC108231486 sema3e sema3e rflnb rflnb sema3d sema3d CDH2 CDH2 LOC108230967 LOC108230967 sox10 sox10 gbx2 gbx2 alx1 alx1 akna akna LOC108239648 LOC108239648 ENSKMAP00000019942 ENSKMAP00000019942 SEMA4D SEMA4D Foxc1 Foxc1 smo smo LOC108238010 LOC108238010 LOC108250076 LOC108250076 nusap1 nusap1 LOC108233996 LOC108233996 dlx2 dlx2 polr1b polr1b LOC108230190 LOC108230190 LOC108235111 LOC108235111 coro1c coro1c LOC108235257 LOC108235257 LOC108239726 LOC108239726 LOC108237396 LOC108237396 ENSKMAP00000023516 ENSKMAP00000023516 ENSKMAP00000023539 ENSKMAP00000023539 LOC108238549 LOC108238549 ENSKMAP00000023552 ENSKMAP00000023552 LOC108243248 LOC108243248 KLHL12 KLHL12 pef1 pef1 ppp3r1 ppp3r1 tasor tasor LOC108234029 LOC108234029 anxa6 anxa6 dlg5 dlg5 sema7a sema7a Wnt16 Wnt16 LOC108251309 LOC108251309 colec10 colec10 LOC108251319 LOC108251319 med12 med12 LOC108248438 LOC108248438 SOX10 SOX10 sh3pxd2a sh3pxd2a LOC108248442 LOC108248442 LOC108244397 LOC108244397 LOC108251369 LOC108251369 LOC108235165 LOC108235165 SMAD4 SMAD4 LOC108240827 LOC108240827 LOC108232825 LOC108232825 ddx17 ddx17 ENSKMAP00000029554 ENSKMAP00000029554 LOC108230648 LOC108230648 fbxl17 fbxl17
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108230078Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (799 aa)
msx1Muscle segment homeobox 1a. (289 aa)
ENSKMAP00000000878Si:ch211-176g6.2. (706 aa)
LOC108243287Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1060 aa)
LOC108244468Sema domain-containing protein; Belongs to the semaphorin family. (812 aa)
LOC108243318WT1 interacting protein. (712 aa)
med13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2158 aa)
sema6aSemaphorin 6A; Belongs to the semaphorin family. (1012 aa)
LOC108247938Si:cabz01100188.1. (919 aa)
KCTD15Potassium channel tetramerization domain containing 15. (264 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1678 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (600 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
LOC108243308Uncharacterized protein; Belongs to the semaphorin family. (623 aa)
rcc2Regulator of chromosome condensation 2. (494 aa)
efna1Ephrin-A1b; Belongs to the ephrin family. (233 aa)
sema6bSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (867 aa)
zfp64Zinc finger protein 64 homolog (mouse). (645 aa)
LOC108230709Forkhead box Q2. (293 aa)
LOC108231423Transforming growth factor beta; Belongs to the TGF-beta family. (419 aa)
LOC108243445Uncharacterized protein; Belongs to the semaphorin family. (880 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1107 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (426 aa)
LOC108249163Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (469 aa)
pdcd6Programmed cell death 6. (185 aa)
snai2Snail family zinc finger 2. (261 aa)
tapt1Transmembrane anterior posterior transformation 1b. (572 aa)
sema5bSema domain-containing protein. (1103 aa)
LOC108250397Endothelin 1. (163 aa)
hmga2Uncharacterized protein. (115 aa)
LOC108251637Uncharacterized protein. (543 aa)
LOC108230473Sema domain-containing protein. (1078 aa)
LOC108230818Si:ch211-129c21.1; Belongs to the semaphorin family. (799 aa)
LOC108231368Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (790 aa)
TMEM100Transmembrane protein 100. (174 aa)
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (797 aa)
sema6dSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1110 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (246 aa)
sema4gUncharacterized protein; Belongs to the semaphorin family. (709 aa)
LOC108239517Semaphorin 4e; Belongs to the semaphorin family. (764 aa)
LOC108251038SH3 and PX domains 2Aa. (1120 aa)
mscMusculin (activated B-cell factor-1). (165 aa)
LOC108239522Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (901 aa)
tgfbr3Transforming growth factor, beta receptor III. (825 aa)
LOC108232708Coronin; Belongs to the WD repeat coronin family. (1205 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (919 aa)
LOC108241743Sema domain-containing protein; Belongs to the semaphorin family. (682 aa)
colec11Collectin sub-family member 11. (273 aa)
retRet proto-oncogene receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1200 aa)
radilRas association and DIL domains. (1168 aa)
fgf2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (155 aa)
LOC108238201Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (421 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
sema4cUncharacterized protein; Belongs to the semaphorin family. (871 aa)
tbx1T-box transcription factor 1. (485 aa)
kbtbd8Kelch repeat and BTB (POZ) domain containing 8. (604 aa)
LOC108236612Transmembrane anterior posterior transformation 1a. (603 aa)
wdr11WD repeat domain 11. (1240 aa)
htr2b5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (466 aa)
LOC108246957Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (913 aa)
LOC108241363SRY-box transcription factor 9b. (475 aa)
LOC108245811Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (342 aa)
LOC108245806Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (342 aa)
LOC108247541Mothers against decapentaplegic homolog. (503 aa)
LOC108228999Mothers against decapentaplegic homolog. (553 aa)
LOC108244723HMG box domain-containing protein. (494 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (634 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (809 aa)
FOXC1Forkhead box C1. (469 aa)
LOC108238182Ephrin-A1a; Belongs to the ephrin family. (224 aa)
sema3gSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (782 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (769 aa)
bmp4Bone morphogenetic protein 4. (403 aa)
ENSKMAP00000016136SRCR domain-containing protein. (131 aa)
tcf21Transcription factor 21. (179 aa)
LOC108244167Sema domain-containing protein. (1098 aa)
cep41Centrosomal protein 41. (366 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (220 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (242 aa)
LOC108236140DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (618 aa)
phactr4Phosphatase and actin regulator. (716 aa)
LOC108231486Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (374 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (796 aa)
rflnbRefilin B. (210 aa)
sema3dSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (807 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (904 aa)
LOC108230967Retinal homeobox gene 3. (312 aa)
sox10SRY-box transcription factor 10. (457 aa)
gbx2Gastrulation brain homeobox 2. (335 aa)
alx1ALX homeobox 1. (312 aa)
aknaUncharacterized protein. (1143 aa)
LOC108239648Phosphatase and actin regulator. (593 aa)
ENSKMAP00000019942Uncharacterized protein. (147 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (906 aa)
Foxc1Forkhead box C1. (213 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (818 aa)
LOC108238010G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (412 aa)
LOC108250076Si:dkey-49n23.1; Belongs to the semaphorin family. (780 aa)
nusap1Nucleolar and spindle associated protein 1. (456 aa)
LOC108233996Nucleolar and coiled-body phosphoprotein 1. (927 aa)
dlx2Distal-less homeobox 2b. (276 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
LOC108230190Sema domain-containing protein; Belongs to the semaphorin family. (835 aa)
LOC108235111Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (864 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (473 aa)
LOC108235257Transcription activation suppressor b. (1835 aa)
LOC108239726Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (423 aa)
LOC108237396Sema domain-containing protein; Belongs to the semaphorin family. (825 aa)
ENSKMAP00000023516Uncharacterized protein. (124 aa)
ENSKMAP00000023539Phosphatase and actin regulator. (167 aa)
LOC108238549Fibronectin 1a. (2509 aa)
ENSKMAP00000023552Phosphatase and actin regulator. (154 aa)
LOC108243248Si:ch211-113g11.6; Belongs to the semaphorin family. (643 aa)
KLHL12Kelch like family member 12. (564 aa)
pef1Penta-EF-hand domain containing 1. (280 aa)
ppp3r1Protein phosphatase 3 regulatory subunit B, alpha. (173 aa)
tasorDUF3715 domain-containing protein. (2043 aa)
LOC108234029Muscle segment homeobox 3. (243 aa)
anxa6Annexin. (660 aa)
dlg5Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (2043 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (662 aa)
Wnt16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (335 aa)
LOC108251309Uncharacterized protein; Belongs to the semaphorin family. (683 aa)
colec10Collectin subfamily member 10. (282 aa)
LOC108251319Si:dkey-154p10.3. (552 aa)
med12Mediator complex subunit 12. (2088 aa)
LOC108248438Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2126 aa)
SOX10SRY-box transcription factor 10. (501 aa)
sh3pxd2aUncharacterized protein. (1095 aa)
LOC108248442Activated leukocyte cell adhesion molecule b. (559 aa)
LOC108244397Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (804 aa)
LOC108251369Phosphatase and actin regulator. (965 aa)
LOC108235165Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (388 aa)
SMAD4Mothers against decapentaplegic homolog. (457 aa)
LOC108240827Bone morphogenetic protein 16. (416 aa)
LOC108232825Neurturin. (229 aa)
ddx17Uncharacterized protein; Belongs to the DEAD box helicase family. (661 aa)
ENSKMAP00000029554Sema domain-containing protein; Belongs to the semaphorin family. (355 aa)
LOC108230648BTB domain-containing protein. (521 aa)
fbxl17F-box and leucine-rich repeat protein 17. (448 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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