STRINGSTRING
lgr4 lgr4 LOC108237634 LOC108237634 cthrc1 cthrc1 tgfb3 tgfb3 LOC108242190 LOC108242190 ednra ednra crb1 crb1 LOC108249163 LOC108249163 ENSKMAP00000006193 ENSKMAP00000006193 LOC108245125 LOC108245125 LOC108233628 LOC108233628 LOC108248660 LOC108248660 nox4 nox4 LOC108228916 LOC108228916 LOC108229717 LOC108229717 ENSKMAP00000011928 ENSKMAP00000011928 lrp5 lrp5 LOC108229763 LOC108229763 cspg4 cspg4 LOC108248208 LOC108248208 sema3c sema3c LOC108246468 LOC108246468 LOC108244740 LOC108244740 LOC108237852 LOC108237852 LOC108249986 LOC108249986 LOC108242427 LOC108242427 LOC108232747 LOC108232747 SRC SRC ENSKMAP00000020208 ENSKMAP00000020208 LOC108246070 LOC108246070 atg5 atg5 LOC108230888 LOC108230888 ncdn ncdn Wnt16 Wnt16 pdlim7 pdlim7 LOC108232213 LOC108232213 acp5 acp5 Plg Plg bmpr2 bmpr2 LOC108247348 LOC108247348
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lgr4Leucine-rich repeat containing G protein-coupled receptor 4. (975 aa)
LOC108237634Tyrosine-protein kinase. (549 aa)
cthrc1Collagen triple helix repeat containing 1b. (277 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC108242190Insulin-like growth factor binding protein 5a. (260 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (426 aa)
crb1Crumbs cell polarity complex component 1. (1287 aa)
LOC108249163Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (469 aa)
ENSKMAP00000006193Uncharacterized protein. (662 aa)
LOC108245125TNF superfamily member 11; Belongs to the tumor necrosis factor family. (264 aa)
LOC108233628Si:dkey-193c22.2. (2413 aa)
LOC108248660Ephrin RBD domain-containing protein; Belongs to the ephrin family. (205 aa)
nox4FAD-binding FR-type domain-containing protein. (622 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC108229717Uncharacterized protein. (431 aa)
ENSKMAP00000011928Low density lipoprotein receptor-related protein 6. (420 aa)
lrp5Low density lipoprotein receptor-related protein 5. (1645 aa)
LOC108229763Uncharacterized protein. (432 aa)
cspg4Chondroitin sulfate proteoglycan 4. (2308 aa)
LOC108248208Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (769 aa)
LOC108246468Uncharacterized protein. (1469 aa)
LOC108244740Zgc:171965. (452 aa)
LOC108237852Zgc:153993. (205 aa)
LOC108249986Crumbs cell polarity complex component 2b. (1462 aa)
LOC108242427Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
LOC108232747Uncharacterized protein. (2561 aa)
SRCTyrosine-protein kinase. (550 aa)
ENSKMAP00000020208Uncharacterized protein. (185 aa)
LOC108246070E74-like factor 3 (ets domain transcription factor, epithelial-specific ). (381 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
LOC108230888T-box transcription factor 5a. (519 aa)
ncdnNeurochondrin. (791 aa)
Wnt16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (335 aa)
pdlim7PDZ and LIM domain 7. (434 aa)
LOC108232213R-spondin 3. (325 aa)
acp5Tartrate-resistant acid phosphatase type 5. (333 aa)
PlgUncharacterized protein. (141 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1061 aa)
LOC108247348Insulin-like growth factor binding protein 5a. (268 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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