STRINGSTRING
sfrp2 sfrp2 SEMA4F SEMA4F LOC108231368 LOC108231368 LOC108230818 LOC108230818 LOC108230473 LOC108230473 LOC108251637 LOC108251637 hmga2 hmga2 meox1 meox1 LOC108250397 LOC108250397 sema5b sema5b LOC108246342 LOC108246342 tapt1 tapt1 ENSKMAP00000006157 ENSKMAP00000006157 pdcd6 pdcd6 LOC108249163 LOC108249163 ufl1 ufl1 ptprc ptprc WNT7A WNT7A ednra ednra pdgfrb pdgfrb LOC108243445 LOC108243445 LOC108231423 LOC108231423 mib1 mib1 LOC108230709 LOC108230709 LOC108233119 LOC108233119 MYOCD MYOCD sema6b sema6b rcc2 rcc2 LOC108243308 LOC108243308 LOC108245037 LOC108245037 leo1 leo1 dicer1 dicer1 KCTD15 KCTD15 sema6a sema6a med13 med13 LOC108243318 LOC108243318 sh2b3 sh2b3 LOC108244468 LOC108244468 LOC108243287 LOC108243287 ENSKMAP00000000878 ENSKMAP00000000878 ENSKMAP00000000736 ENSKMAP00000000736 GREM1 GREM1 msx1 msx1 SEMA4D SEMA4D SOX10 SOX10 LOC108248438 LOC108248438 med12 med12 colec10 colec10 LOC108251309 LOC108251309 rspo1 rspo1 sema7a sema7a anxa6 anxa6 LOC108234029 LOC108234029 LOC108228520 LOC108228520 pef1 pef1 KLHL12 KLHL12 LOC108243248 LOC108243248 SOX18 SOX18 LOC108228493 LOC108228493 tbx3 tbx3 LOC108239148 LOC108239148 ENSKMAP00000023552 ENSKMAP00000023552 LOC108238549 LOC108238549 ENSKMAP00000023539 ENSKMAP00000023539 ENSKMAP00000023516 ENSKMAP00000023516 mettl5 mettl5 LOC108237396 LOC108237396 LOC108239726 LOC108239726 LOC108246614 LOC108246614 fev fev coro1c coro1c hand2 hand2 LOC108235111 LOC108235111 LOC108230190 LOC108230190 dlx2 dlx2 LOC108233996 LOC108233996 nusap1 nusap1 LOC108250076 LOC108250076 LOC108230349 LOC108230349 LOC108238010 LOC108238010 smo smo Foxc1 Foxc1 LOC108228374 LOC108228374 ENSKMAP00000019942 ENSKMAP00000019942 LOC108239648 LOC108239648 alx1 alx1 wnt7a wnt7a gbx2 gbx2 sox10 sox10 LOC108230967 LOC108230967 CDH2 CDH2 batf batf sema3d sema3d setd2 setd2 LOC108230078 LOC108230078 sema3e sema3e LOC108247076 LOC108247076 phactr4 phactr4 fgf3 fgf3 fgf19 fgf19 shh shh cep41 cep41 LOC108245305 LOC108245305 LOC108244167 LOC108244167 xrcc5 xrcc5 sema3c sema3c sema3g sema3g FOXC1 FOXC1 sema3b sema3b nelfb nelfb LOC108244723 LOC108244723 LOC108231024 LOC108231024 ptch2 ptch2 LOC108228999 LOC108228999 LOC108239578 LOC108239578 gpm6a gpm6a LOC108251136 LOC108251136 LOC108247541 LOC108247541 srf srf LOC108245806 LOC108245806 LOC108245811 LOC108245811 LOC108241363 LOC108241363 LOC108246957 LOC108246957 htr2b htr2b wdr11 wdr11 LOC108236612 LOC108236612 kbtbd8 kbtbd8 tbx1 tbx1 sema4c sema4c phox2b phox2b notch1 notch1 LOC108238201 LOC108238201 bbs12 bbs12 radil radil ret ret colec11 colec11 LOC108241743 LOC108241743 nrp1 nrp1 LOC108232708 LOC108232708 jarid2 jarid2 LOC108239522 LOC108239522 LOC108251038 LOC108251038 ENSKMAP00000009463 ENSKMAP00000009463 LOC108239517 LOC108239517 sema4g sema4g LOC108232144 LOC108232144 ENSKMAP00000009054 ENSKMAP00000009054 gdnf gdnf phf5a phf5a sema6d sema6d fbxl17 fbxl17 LOC108230648 LOC108230648 LOC108233514 LOC108233514 ENSKMAP00000029554 ENSKMAP00000029554 LOC108232825 LOC108232825 ercc2 ercc2 SMAD4 SMAD4 LOC108251369 LOC108251369 LOC108244397 LOC108244397 dll1 dll1 LOC108248442 LOC108248442 sh3pxd2a sh3pxd2a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sfrp2Secreted frizzled-related protein 2. (308 aa)
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (797 aa)
LOC108231368Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (790 aa)
LOC108230818Si:ch211-129c21.1; Belongs to the semaphorin family. (799 aa)
LOC108230473Sema domain-containing protein. (1078 aa)
LOC108251637Uncharacterized protein. (543 aa)
hmga2Uncharacterized protein. (115 aa)
meox1Mesenchyme homeobox 1. (243 aa)
LOC108250397Endothelin 1. (163 aa)
sema5bSema domain-containing protein. (1103 aa)
LOC108246342Proteasome 26S subunit, non-ATPase 11b. (422 aa)
tapt1Transmembrane anterior posterior transformation 1b. (572 aa)
ENSKMAP00000006157Uncharacterized protein. (391 aa)
pdcd6Programmed cell death 6. (185 aa)
LOC108249163Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (469 aa)
ufl1UFM1-specific ligase 1. (780 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1165 aa)
WNT7AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (254 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (426 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1107 aa)
LOC108243445Uncharacterized protein; Belongs to the semaphorin family. (880 aa)
LOC108231423Transforming growth factor beta; Belongs to the TGF-beta family. (419 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1037 aa)
LOC108230709Forkhead box Q2. (293 aa)
LOC108233119Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H; Belongs to the semaphorin family. (793 aa)
MYOCDMyocardin. (840 aa)
sema6bSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (867 aa)
rcc2Regulator of chromosome condensation 2. (494 aa)
LOC108243308Uncharacterized protein; Belongs to the semaphorin family. (623 aa)
LOC108245037Odd-skipped related transcription factor 1. (268 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (600 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1678 aa)
KCTD15Potassium channel tetramerization domain containing 15. (264 aa)
sema6aSemaphorin 6A; Belongs to the semaphorin family. (1012 aa)
med13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2158 aa)
LOC108243318WT1 interacting protein. (712 aa)
sh2b3SH2B adaptor protein 3. (726 aa)
LOC108244468Sema domain-containing protein; Belongs to the semaphorin family. (812 aa)
LOC108243287Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1060 aa)
ENSKMAP00000000878Si:ch211-176g6.2. (706 aa)
ENSKMAP00000000736Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (340 aa)
GREM1Gremlin; Belongs to the DAN family. (172 aa)
msx1Muscle segment homeobox 1a. (289 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (906 aa)
SOX10SRY-box transcription factor 10. (501 aa)
LOC108248438Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2126 aa)
med12Mediator complex subunit 12. (2088 aa)
colec10Collectin subfamily member 10. (282 aa)
LOC108251309Uncharacterized protein; Belongs to the semaphorin family. (683 aa)
rspo1R-spondin 1. (281 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (662 aa)
anxa6Annexin. (660 aa)
LOC108234029Muscle segment homeobox 3. (243 aa)
LOC108228520Uncharacterized protein. (282 aa)
pef1Penta-EF-hand domain containing 1. (280 aa)
KLHL12Kelch like family member 12. (564 aa)
LOC108243248Si:ch211-113g11.6; Belongs to the semaphorin family. (643 aa)
SOX18SRY-box transcription factor 18. (573 aa)
LOC108228493Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (666 aa)
tbx3T-box transcription factor 3a. (711 aa)
LOC108239148Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (237 aa)
ENSKMAP00000023552Phosphatase and actin regulator. (154 aa)
LOC108238549Fibronectin 1a. (2509 aa)
ENSKMAP00000023539Phosphatase and actin regulator. (167 aa)
ENSKMAP00000023516Uncharacterized protein. (124 aa)
mettl5Methyltransferase like 5. (237 aa)
LOC108237396Sema domain-containing protein; Belongs to the semaphorin family. (825 aa)
LOC108239726Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (423 aa)
LOC108246614Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
fevFEV transcription factor, ETS family member. (220 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (473 aa)
hand2Heart and neural crest derivatives expressed 2. (245 aa)
LOC108235111Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (864 aa)
LOC108230190Sema domain-containing protein; Belongs to the semaphorin family. (835 aa)
dlx2Distal-less homeobox 2b. (276 aa)
LOC108233996Nucleolar and coiled-body phosphoprotein 1. (927 aa)
nusap1Nucleolar and spindle associated protein 1. (456 aa)
LOC108250076Si:dkey-49n23.1; Belongs to the semaphorin family. (780 aa)
LOC108230349SRY-box transcription factor 17. (395 aa)
LOC108238010G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (412 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (818 aa)
Foxc1Forkhead box C1. (213 aa)
LOC108228374FZ domain-containing protein. (285 aa)
ENSKMAP00000019942Uncharacterized protein. (147 aa)
LOC108239648Phosphatase and actin regulator. (593 aa)
alx1ALX homeobox 1. (312 aa)
wnt7aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
gbx2Gastrulation brain homeobox 2. (335 aa)
sox10SRY-box transcription factor 10. (457 aa)
LOC108230967Retinal homeobox gene 3. (312 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (904 aa)
batfBasic leucine zipper transcription factor, ATF-like. (124 aa)
sema3dSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (807 aa)
setd2SET domain containing 2, histone lysine methyltransferase. (2591 aa)
LOC108230078Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (799 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (796 aa)
LOC108247076PCI domain-containing protein. (422 aa)
phactr4Phosphatase and actin regulator. (716 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (242 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (220 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
cep41Centrosomal protein 41. (366 aa)
LOC108245305Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (805 aa)
LOC108244167Sema domain-containing protein. (1098 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (725 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (769 aa)
sema3gSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (782 aa)
FOXC1Forkhead box C1. (469 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (809 aa)
nelfbNegative elongation factor complex member B. (583 aa)
LOC108244723HMG box domain-containing protein. (494 aa)
LOC108231024Notch receptor 1a. (2478 aa)
ptch2Patched 2. (1488 aa)
LOC108228999Mothers against decapentaplegic homolog. (553 aa)
LOC108239578T-cell acute lymphocytic leukemia 1. (385 aa)
gpm6aGlycoprotein M6Aa. (278 aa)
LOC108251136MADS-box domain-containing protein. (494 aa)
LOC108247541Mothers against decapentaplegic homolog. (503 aa)
srfSerum response factor b. (596 aa)
LOC108245806Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (342 aa)
LOC108245811Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (342 aa)
LOC108241363SRY-box transcription factor 9b. (475 aa)
LOC108246957Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (913 aa)
htr2b5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (466 aa)
wdr11WD repeat domain 11. (1240 aa)
LOC108236612Transmembrane anterior posterior transformation 1a. (603 aa)
kbtbd8Kelch repeat and BTB (POZ) domain containing 8. (604 aa)
tbx1T-box transcription factor 1. (485 aa)
sema4cUncharacterized protein; Belongs to the semaphorin family. (871 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
notch1Notch receptor 1b. (2519 aa)
LOC108238201Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (421 aa)
bbs12Bardet-Biedl syndrome 12. (637 aa)
radilRas association and DIL domains. (1168 aa)
retRet proto-oncogene receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1200 aa)
colec11Collectin sub-family member 11. (273 aa)
LOC108241743Sema domain-containing protein; Belongs to the semaphorin family. (682 aa)
nrp1Neuropilin; Belongs to the neuropilin family. (919 aa)
LOC108232708Coronin; Belongs to the WD repeat coronin family. (1205 aa)
jarid2Jumonji, AT rich interactive domain 2b. (1445 aa)
LOC108239522Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (901 aa)
LOC108251038SH3 and PX domains 2Aa. (1120 aa)
ENSKMAP00000009463BHLH domain-containing protein. (116 aa)
LOC108239517Semaphorin 4e; Belongs to the semaphorin family. (764 aa)
sema4gUncharacterized protein; Belongs to the semaphorin family. (709 aa)
LOC108232144Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga; Belongs to the semaphorin family. (746 aa)
ENSKMAP00000009054Uncharacterized protein. (65 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (246 aa)
phf5aPHD finger protein 5A. (110 aa)
sema6dSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1110 aa)
fbxl17F-box and leucine-rich repeat protein 17. (448 aa)
LOC108230648BTB domain-containing protein. (521 aa)
LOC108233514Gremlin 1a, DAN family BMP antagonist. (173 aa)
ENSKMAP00000029554Sema domain-containing protein; Belongs to the semaphorin family. (355 aa)
LOC108232825Neurturin. (229 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
SMAD4Mothers against decapentaplegic homolog. (457 aa)
LOC108251369Phosphatase and actin regulator. (965 aa)
LOC108244397Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (804 aa)
dll1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (806 aa)
LOC108248442Activated leukocyte cell adhesion molecule b. (559 aa)
sh3pxd2aUncharacterized protein. (1095 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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