16 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108234142	Uncharacterized protein. (541 aa)
	commd6	COMM domain containing 6. (197 aa)
	LOC108231757	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (306 aa)
	LOC108231735	Proteasome subunit alpha type. (246 aa)
	cdk5rap3	CDK5 regulatory subunit associated protein 3. (505 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	brms1	BRMS1 transcriptional repressor and anoikis regulator. (277 aa)
	LOC108240605	Metadherin a. (491 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (317 aa)
	psma6	Proteasome subunit alpha type. (246 aa)
	commd7	COMM domain containing 7. (209 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	NFKBID	NFKB inhibitor delta. (329 aa)
	LOC108247317	Proteasome subunit alpha type. (258 aa)
	ENSKMAP00000028580	Programmed cell death 11. (901 aa)
	faf1	Fas (TNFRSF6) associated factor 1. (671 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108231735	psma6	ENSKMAP00000004948	ENSKMAP00000011091	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.900
LOC108231757	LOC108250440	ENSKMAP00000004898	ENSKMAP00000008734	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	E1A binding protein p300 a.	0.411
LOC108231757	NFKBID	ENSKMAP00000004898	ENSKMAP00000023281	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	NFKB inhibitor delta.	0.403
LOC108231757	ep300	ENSKMAP00000004898	ENSKMAP00000020640	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	E1A binding protein p300 b.	0.411
LOC108231757	nfkbia	ENSKMAP00000004898	ENSKMAP00000011039	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.903
LOC108250440	LOC108231757	ENSKMAP00000008734	ENSKMAP00000004898	E1A binding protein p300 a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.411
LOC108250440	nfkbia	ENSKMAP00000008734	ENSKMAP00000011039	E1A binding protein p300 a.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.411
NFKBID	LOC108231757	ENSKMAP00000023281	ENSKMAP00000004898	NFKB inhibitor delta.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.403
NFKBID	nfkbia	ENSKMAP00000023281	ENSKMAP00000011039	NFKB inhibitor delta.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.406
commd6	commd7	ENSKMAP00000004553	ENSKMAP00000018601	COMM domain containing 6.	COMM domain containing 7.	0.903
commd7	commd6	ENSKMAP00000018601	ENSKMAP00000004553	COMM domain containing 7.	COMM domain containing 6.	0.903
ep300	LOC108231757	ENSKMAP00000020640	ENSKMAP00000004898	E1A binding protein p300 b.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.411
ep300	nfkbia	ENSKMAP00000020640	ENSKMAP00000011039	E1A binding protein p300 b.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.411
nfkbia	LOC108231757	ENSKMAP00000011039	ENSKMAP00000004898	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.903
nfkbia	LOC108250440	ENSKMAP00000011039	ENSKMAP00000008734	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	E1A binding protein p300 a.	0.411
nfkbia	NFKBID	ENSKMAP00000011039	ENSKMAP00000023281	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	NFKB inhibitor delta.	0.406
nfkbia	ep300	ENSKMAP00000011039	ENSKMAP00000020640	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	E1A binding protein p300 b.	0.411
psma6	LOC108231735	ENSKMAP00000011091	ENSKMAP00000004948	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.900