STRINGSTRING
oat oat tmed8 tmed8 noxred1 noxred1 LOC108247683 LOC108247683 LOC108236293 LOC108236293 LOC108241261 LOC108241261 pycr3 pycr3 ALDH18A1 ALDH18A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
oatOrnithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
tmed8Transmembrane p24 trafficking protein 8. (272 aa)
noxred1NADP-dependent oxidoreductase domain containing 1. (288 aa)
LOC108247683Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (772 aa)
LOC108236293Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (323 aa)
LOC108241261Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (321 aa)
pycr3Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (310 aa)
ALDH18A1Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (779 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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