53 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108235026	Uncharacterized protein. (216 aa)
	strip1	Striatin interacting protein 1. (807 aa)
	apex1	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (310 aa)
	TNNI2	Troponin I type 2b (skeletal, fast), tandem duplicate 1. (175 aa)
	SGCZ	Sarcoglycan zeta. (308 aa)
	washc5	WASH complex subunit 5. (1159 aa)
	tcap	Titin-cap (telethonin). (179 aa)
	LOC108235179	Troponin I type 1a (skeletal, slow). (171 aa)
	csrp3	Cysteine and glycine-rich protein 3 (cardiac LIM protein). (193 aa)
	ENSKMAP00000021311	Uncharacterized protein. (195 aa)
	alpk2	Uncharacterized protein. (1469 aa)
	TNNC1	Troponin C type 1a (slow). (175 aa)
	ccm2	CCM2 scaffold protein. (458 aa)
	LOC112451337	Uncharacterized protein. (776 aa)
	scn1b	Sodium channel, voltage-gated, type I, beta b. (226 aa)
	slc2a12	Solute carrier family 2 member 12; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (568 aa)
	LOC108240106	Uncharacterized protein. (428 aa)
	ENSKMAP00000014809	Uncharacterized protein. (119 aa)
	krit1	KRIT1 ankyrin repeat containing. (741 aa)
	nup155	Nucleoporin 155. (1367 aa)
	scn3b	Sodium channel, voltage-gated, type III, beta. (218 aa)
	nkx2-5	NK2 homeobox 5. (302 aa)
	LOC108248119	Troponin I2, fast skeletal type. (171 aa)
	LOC108248116	Uncharacterized protein. (184 aa)
	LOC108234899	Myosin, light chain 2b, regulatory, cardiac, slow. (173 aa)
	LOC108229593	Sodium channel, voltage-gated, type I, beta a. (214 aa)
	LOC108234851	Uncharacterized protein. (299 aa)
	mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2516 aa)
	myl7	Myosin, light chain 7, regulatory. (172 aa)
	LOC108229966	Uncharacterized protein. (180 aa)
	LOC108229967	Troponin I4a. (171 aa)
	LOC108241640	Myosin, light chain 13. (188 aa)
	LOC108250355	Uncharacterized protein. (161 aa)
	lrrc39	Uncharacterized protein. (118 aa)
	vegfb	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (253 aa)
	sgcd	Sarcoglycan, delta (dystrophin-associated glycoprotein). (293 aa)
	taz	Tafazzin family protein; Belongs to the taffazin family. (241 aa)
	LOC108240466	Sodium channel, voltage-gated, type II, beta. (220 aa)
	LOC108240485	Sodium channel, voltage-gated, type IV, beta a. (237 aa)
	ext2	Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. (719 aa)
	LOC108250929	Uncharacterized protein. (178 aa)
	Rangrf	RAN guanine nucleotide release factor. (189 aa)
	kcnq1	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (669 aa)
	dnd1	RRM domain-containing protein. (375 aa)
	sgcg	Sarcoglycan, gamma. (290 aa)
	ENSKMAP00000000990	Potassium voltage-gated channel, Isk-related family, member 4. (139 aa)
	LOC108237363	SET and MYND domain containing 2a. (435 aa)
	MYL2	Myosin light chain 2. (169 aa)
	LOC108243707	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (354 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	LOC108246605	Uncharacterized protein; Belongs to the potassium channel family. (649 aa)
	hand2	Heart and neural crest derivatives expressed 2. (245 aa)
	LOC108231684	Troponin I type 1b (skeletal, slow). (170 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000000990	ENSKMAP00000014809	ENSKMAP00000000990	ENSKMAP00000014809	Potassium voltage-gated channel, Isk-related family, member 4.	Uncharacterized protein.	0.481
ENSKMAP00000000990	LOC108246605	ENSKMAP00000000990	ENSKMAP00000022936	Potassium voltage-gated channel, Isk-related family, member 4.	Uncharacterized protein; Belongs to the potassium channel family.	0.665
ENSKMAP00000000990	kcnq1	ENSKMAP00000000990	ENSKMAP00000004034	Potassium voltage-gated channel, Isk-related family, member 4.	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.	0.665
ENSKMAP00000014809	ENSKMAP00000000990	ENSKMAP00000014809	ENSKMAP00000000990	Uncharacterized protein.	Potassium voltage-gated channel, Isk-related family, member 4.	0.481
ENSKMAP00000014809	LOC108240485	ENSKMAP00000014809	ENSKMAP00000004638	Uncharacterized protein.	Sodium channel, voltage-gated, type IV, beta a.	0.404
ENSKMAP00000014809	LOC108246605	ENSKMAP00000014809	ENSKMAP00000022936	Uncharacterized protein.	Uncharacterized protein; Belongs to the potassium channel family.	0.796
ENSKMAP00000014809	kcnq1	ENSKMAP00000014809	ENSKMAP00000004034	Uncharacterized protein.	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.	0.796
ENSKMAP00000021311	LOC108229966	ENSKMAP00000021311	ENSKMAP00000006374	Uncharacterized protein.	Uncharacterized protein.	0.616
ENSKMAP00000021311	LOC108229967	ENSKMAP00000021311	ENSKMAP00000006307	Uncharacterized protein.	Troponin I4a.	0.616
ENSKMAP00000021311	LOC108231684	ENSKMAP00000021311	ENSKMAP00000021332	Uncharacterized protein.	Troponin I type 1b (skeletal, slow).	0.685
ENSKMAP00000021311	LOC108234899	ENSKMAP00000021311	ENSKMAP00000009591	Uncharacterized protein.	Myosin, light chain 2b, regulatory, cardiac, slow.	0.762
ENSKMAP00000021311	LOC108235026	ENSKMAP00000021311	ENSKMAP00000021711	Uncharacterized protein.	Uncharacterized protein.	0.551
ENSKMAP00000021311	LOC108235179	ENSKMAP00000021311	ENSKMAP00000027508	Uncharacterized protein.	Troponin I type 1a (skeletal, slow).	0.685
ENSKMAP00000021311	LOC108241640	ENSKMAP00000021311	ENSKMAP00000005400	Uncharacterized protein.	Myosin, light chain 13.	0.901
ENSKMAP00000021311	LOC108248116	ENSKMAP00000021311	ENSKMAP00000009958	Uncharacterized protein.	Uncharacterized protein.	0.596
ENSKMAP00000021311	LOC108248119	ENSKMAP00000021311	ENSKMAP00000009992	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.596
ENSKMAP00000021311	LOC108250355	ENSKMAP00000021311	ENSKMAP00000005359	Uncharacterized protein.	Uncharacterized protein.	0.669
ENSKMAP00000021311	LOC108250929	ENSKMAP00000021311	ENSKMAP00000004284	Uncharacterized protein.	Uncharacterized protein.	0.596
ENSKMAP00000021311	MYL2	ENSKMAP00000021311	ENSKMAP00000027004	Uncharacterized protein.	Myosin light chain 2.	0.975
ENSKMAP00000021311	TNNC1	ENSKMAP00000021311	ENSKMAP00000018083	Uncharacterized protein.	Troponin C type 1a (slow).	0.673