21 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108240719	Small ubiquitin-related modifier. (94 aa)
	cbfb	Core-binding factor subunit beta. (188 aa)
	SP3	Sp3a transcription factor. (701 aa)
	LOC108236207	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	LOC108244322	BHLH domain-containing protein. (445 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	sae1	SUMO1 activating enzyme subunit 1. (345 aa)
	LOC108235188	Sp3b transcription factor. (661 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	kri1	KRI1 homolog. (767 aa)
	LOC108232577	Small ubiquitin-related modifier. (94 aa)
	gar1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (211 aa)
	LOC108239578	T-cell acute lymphocytic leukemia 1. (385 aa)
	ENSKMAP00000009463	BHLH domain-containing protein. (116 aa)
	LOC108235533	Microfibril associated protein 5. (127 aa)
	cdk5rap3	CDK5 regulatory subunit associated protein 3. (505 aa)
	sumo1	Small ubiquitin-related modifier. (105 aa)
	mib1	Mindbomb E3 ubiquitin protein ligase 1. (1037 aa)
	adar	Adenosine deaminase RNA specific. (1255 aa)
	LOC108242722	Small ubiquitin-related modifier. (96 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000009463	cbfb	ENSKMAP00000009463	ENSKMAP00000017594	BHLH domain-containing protein.	Core-binding factor subunit beta.	0.673
LOC108232577	LOC108236207	ENSKMAP00000016078	ENSKMAP00000021963	Small ubiquitin-related modifier.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.983
LOC108232577	sae1	ENSKMAP00000016078	ENSKMAP00000028827	Small ubiquitin-related modifier.	SUMO1 activating enzyme subunit 1.	0.907
LOC108232577	sumo1	ENSKMAP00000016078	ENSKMAP00000005306	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.660
LOC108232577	ube2i	ENSKMAP00000016078	ENSKMAP00000016252	Small ubiquitin-related modifier.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.983
LOC108235188	sumo1	ENSKMAP00000016911	ENSKMAP00000005306	Sp3b transcription factor.	Small ubiquitin-related modifier.	0.447
LOC108236207	LOC108232577	ENSKMAP00000021963	ENSKMAP00000016078	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.983
LOC108236207	LOC108240719	ENSKMAP00000021963	ENSKMAP00000016972	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.983
LOC108236207	LOC108242722	ENSKMAP00000021963	ENSKMAP00000001814	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.983
LOC108236207	sae1	ENSKMAP00000021963	ENSKMAP00000028827	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	SUMO1 activating enzyme subunit 1.	0.956
LOC108236207	sumo1	ENSKMAP00000021963	ENSKMAP00000005306	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.972
LOC108236207	sumo2	ENSKMAP00000021963	ENSKMAP00000028132	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Small ubiquitin-related modifier.	0.983
LOC108236207	ube2i	ENSKMAP00000021963	ENSKMAP00000016252	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.900
LOC108239578	cbfb	ENSKMAP00000013785	ENSKMAP00000017594	T-cell acute lymphocytic leukemia 1.	Core-binding factor subunit beta.	0.673
LOC108240719	LOC108236207	ENSKMAP00000016972	ENSKMAP00000021963	Small ubiquitin-related modifier.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.983
LOC108240719	sae1	ENSKMAP00000016972	ENSKMAP00000028827	Small ubiquitin-related modifier.	SUMO1 activating enzyme subunit 1.	0.907
LOC108240719	sumo1	ENSKMAP00000016972	ENSKMAP00000005306	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.660
LOC108240719	ube2i	ENSKMAP00000016972	ENSKMAP00000016252	Small ubiquitin-related modifier.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.983
LOC108242722	LOC108236207	ENSKMAP00000001814	ENSKMAP00000021963	Small ubiquitin-related modifier.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.983
LOC108242722	sae1	ENSKMAP00000001814	ENSKMAP00000028827	Small ubiquitin-related modifier.	SUMO1 activating enzyme subunit 1.	0.921