STRINGSTRING
LOC108238578 LOC108238578 msx1 msx1 LOC108250251 LOC108250251 ankrd11 ankrd11 lef1 lef1 tgfb3 tgfb3 LOC108250906 LOC108250906 LOC108250440 LOC108250440 crispld1 crispld1 LOC108251049 LOC108251049 specc1l specc1l sgpl1 sgpl1 LOC108228916 LOC108228916 pitx2 pitx2 LOC108230469 LOC108230469 LOC108242427 LOC108242427 LOC108232456 LOC108232456 ep300 ep300 LOC108243697 LOC108243697 LOC108242098 LOC108242098 LOC108238601 LOC108238601
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108238578Cysteine-serine-rich nuclear protein 1a. (577 aa)
msx1Muscle segment homeobox 1a. (289 aa)
LOC108250251Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (393 aa)
ankrd11Ankyrin repeat domain 11. (2822 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC108250906Asp-B-Hydro_N domain-containing protein. (460 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
crispld1Cysteine-rich secretory protein LCCL domain containing 1a. (332 aa)
LOC108251049Cysteine-rich secretory protein LCCL domain containing 2. (516 aa)
specc1lSperm antigen with calponin homology and coiled-coil domains 1-like a. (1141 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
pitx2Homeobox protein. (312 aa)
LOC108230469Cysteine-serine-rich nuclear protein 1b. (570 aa)
LOC108242427Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
LOC108232456Si:ch211-195o20.7. (602 aa)
ep300E1A binding protein p300 b. (2785 aa)
LOC108243697Dickkopf WNT signaling pathway inhibitor 1a. (252 aa)
LOC108242098Uncharacterized protein. (672 aa)
LOC108238601Cysteine-rich secretory protein LCCL domain containing 1b. (511 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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