STRINGSTRING
LOC108240466 LOC108240466 LOC108248208 LOC108248208 ENSKMAP00000000990 ENSKMAP00000000990 LOC108229593 LOC108229593 LOC108242922 LOC108242922 pln pln kcnq1 kcnq1 nup155 nup155 scn3b scn3b zmpste24 zmpste24 ENSKMAP00000011965 ENSKMAP00000011965 ENSKMAP00000014809 ENSKMAP00000014809 LOC108240485 LOC108240485 LOC108236365 LOC108236365 gja5 gja5 rnf207 rnf207 LOC108246605 LOC108246605 scn1b scn1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108240466Sodium channel, voltage-gated, type II, beta. (220 aa)
LOC108248208Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
ENSKMAP00000000990Potassium voltage-gated channel, Isk-related family, member 4. (139 aa)
LOC108229593Sodium channel, voltage-gated, type I, beta a. (214 aa)
LOC108242922Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (390 aa)
plnCardiac phospholamban; Reversibly inhibits the activity of ATP2A2 in cardiac sarcoplasmic reticulum by decreasing the apparent affinity of the ATPase for Ca(2+). Modulates the contractility of the heart muscle in response to physiological stimuli via its effects on ATP2A2. Modulates calcium re-uptake during muscle relaxation and plays an important role in calcium homeostasis in the heart muscle. The degree of ATP2A2 inhibition depends on the oligomeric state of PLN. (53 aa)
kcnq1Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (669 aa)
nup155Nucleoporin 155. (1367 aa)
scn3bSodium channel, voltage-gated, type III, beta. (218 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
ENSKMAP00000011965Uncharacterized protein. (107 aa)
ENSKMAP00000014809Uncharacterized protein. (119 aa)
LOC108240485Sodium channel, voltage-gated, type IV, beta a. (237 aa)
LOC108236365Junction plakoglobin a. (725 aa)
gja5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (377 aa)
rnf207Ring finger protein 207a. (550 aa)
LOC108246605Uncharacterized protein; Belongs to the potassium channel family. (649 aa)
scn1bSodium channel, voltage-gated, type I, beta b. (226 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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