55 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TPM1	Uncharacterized protein; Belongs to the tropomyosin family. (289 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
	slc40a1	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (566 aa)
	LOC108242564	Tropomyosin 2 (beta); Belongs to the tropomyosin family. (284 aa)
	LOC108231483	Tetraspanin. (218 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (596 aa)
	LOC108232775	Zmp:0000000662. (648 aa)
	SRC	Tyrosine-protein kinase. (550 aa)
	LOC108236847	5-aminolevulinate synthase. (591 aa)
	ENSKMAP00000018594	Glycoprotein IX (platelet). (249 aa)
	LOC108235333	Ribosomal protein S19. (146 aa)
	Nfil3	Nuclear factor, interleukin 3 regulated. (427 aa)
	LOC108247579	Zgc:113054. (551 aa)
	maea	Macrophage erythroblast attacher. (396 aa)
	RPS19	Ribosomal protein S19. (152 aa)
	LOC108239578	T-cell acute lymphocytic leukemia 1. (385 aa)
	LOC108251136	MADS-box domain-containing protein. (494 aa)
	srf	Serum response factor b. (596 aa)
	lyar	Ly1 antibody reactive. (346 aa)
	LOC108229763	Uncharacterized protein. (432 aa)
	LOC108237229	Fam20C domain-containing protein. (581 aa)
	ptpn6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (608 aa)
	rnf145	Ring finger protein 145b. (737 aa)
	LOC108238304	Abl-interactor 1b. (495 aa)
	ENSKMAP00000009463	BHLH domain-containing protein. (116 aa)
	LOC108236588	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family. (338 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	LOC108233149	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	LOC108245125	TNF superfamily member 11; Belongs to the tumor necrosis factor family. (264 aa)
	LOC108228750	Uncharacterized protein. (332 aa)
	smad1	Mothers against decapentaplegic homolog. (467 aa)
	gp1bb	Glycoprotein Ib platelet subunit beta. (207 aa)
	LOC108237634	Tyrosine-protein kinase. (549 aa)
	atp6ap1	ATPase H+ transporting accessory protein 1b. (468 aa)
	lmo2	LIM domain only 2 (rhombotin-like 1). (160 aa)
	sh2b3	SH2B adaptor protein 3. (726 aa)
	tpm3	Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
	bdh2	3-hydroxybutyrate dehydrogenase, type 2. (245 aa)
	melk	Non-specific serine/threonine protein kinase. (622 aa)
	ENSKMAP00000025858	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (527 aa)
	LOC108243698	Phospholipase A(2). (147 aa)
	LOC108235148	Tetraspanin. (214 aa)
	LOC108239179	FAM20C golgi associated secretory pathway kinase a. (585 aa)
	ENSKMAP00000027587	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (434 aa)
	LOC108244378	GATA binding protein 1a. (426 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	LOC108232925	Tropomyosin 4; Belongs to the tropomyosin family. (284 aa)
	tert	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1104 aa)
	tpm4	Tropomyosin 4a; Belongs to the tropomyosin family. (284 aa)
	nrros	Negative regulator of reactive oxygen species. (684 aa)
	LOC108237348	Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
	ABI1	Abl-interactor 1a. (558 aa)
	ENSKMAP00000025824	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (510 aa)
	ENSKMAP00000025845	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (462 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABI1	LOC108238304	ENSKMAP00000024862	ENSKMAP00000010041	Abl-interactor 1a.	Abl-interactor 1b.	0.901
ENSKMAP00000009463	LOC108228750	ENSKMAP00000009463	ENSKMAP00000005867	BHLH domain-containing protein.	Uncharacterized protein.	0.738
ENSKMAP00000009463	LOC108244378	ENSKMAP00000009463	ENSKMAP00000028401	BHLH domain-containing protein.	GATA binding protein 1a.	0.738
ENSKMAP00000009463	LOC108250440	ENSKMAP00000009463	ENSKMAP00000008734	BHLH domain-containing protein.	E1A binding protein p300 a.	0.411
ENSKMAP00000009463	ep300	ENSKMAP00000009463	ENSKMAP00000020640	BHLH domain-containing protein.	E1A binding protein p300 b.	0.411
ENSKMAP00000009463	lmo2	ENSKMAP00000009463	ENSKMAP00000002065	BHLH domain-containing protein.	LIM domain only 2 (rhombotin-like 1).	0.957
ENSKMAP00000018594	gp1bb	ENSKMAP00000018594	ENSKMAP00000004572	Glycoprotein IX (platelet).	Glycoprotein Ib platelet subunit beta.	0.886
LOC108228750	ENSKMAP00000009463	ENSKMAP00000005867	ENSKMAP00000009463	Uncharacterized protein.	BHLH domain-containing protein.	0.738
LOC108228750	LOC108236847	ENSKMAP00000005867	ENSKMAP00000019404	Uncharacterized protein.	5-aminolevulinate synthase.	0.444
LOC108228750	LOC108239578	ENSKMAP00000005867	ENSKMAP00000013785	Uncharacterized protein.	T-cell acute lymphocytic leukemia 1.	0.738
LOC108228750	LOC108250440	ENSKMAP00000005867	ENSKMAP00000008734	Uncharacterized protein.	E1A binding protein p300 a.	0.643
LOC108228750	ep300	ENSKMAP00000005867	ENSKMAP00000020640	Uncharacterized protein.	E1A binding protein p300 b.	0.643
LOC108228750	lmo2	ENSKMAP00000005867	ENSKMAP00000002065	Uncharacterized protein.	LIM domain only 2 (rhombotin-like 1).	0.933
LOC108229763	nrros	ENSKMAP00000012549	ENSKMAP00000023701	Uncharacterized protein.	Negative regulator of reactive oxygen species.	0.433
LOC108233149	LOC108237634	ENSKMAP00000007317	ENSKMAP00000002899	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.540
LOC108233149	SRC	ENSKMAP00000007317	ENSKMAP00000019871	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.540
LOC108233149	ptpn11	ENSKMAP00000007317	ENSKMAP00000020601	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.901
LOC108235333	RPS19	ENSKMAP00000016928	ENSKMAP00000014352	Ribosomal protein S19.	Ribosomal protein S19.	0.901
LOC108235333	lyar	ENSKMAP00000016928	ENSKMAP00000013160	Ribosomal protein S19.	Ly1 antibody reactive.	0.606
LOC108235333	med1	ENSKMAP00000016928	ENSKMAP00000023121	Ribosomal protein S19.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.936