35 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	ENSKMAP00000019480	Im:7152348. (113 aa)
	LOC108249884	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (516 aa)
	prpf19	Pre-mRNA processing factor 19. (505 aa)
	rnf213	Ring finger protein 213a. (4484 aa)
	BFAR	Bifunctional apoptosis regulator. (455 aa)
	hectd1	HECT domain containing 1. (2328 aa)
	LOC108235011	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
	LOC108233117	E3 ubiquitin-protein ligase. (897 aa)
	LOC108239446	Ring finger protein 126. (313 aa)
	LOC108244062	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (504 aa)
	ube2v2	Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
	LOC108230570	RING-type domain-containing protein. (327 aa)
	ube2n	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (573 aa)
	arih2	RBR-type E3 ubiquitin transferase. (508 aa)
	Prkn	RBR-type E3 ubiquitin transferase. (174 aa)
	rnf115	Ring finger protein 115. (307 aa)
	ENSKMAP00000002137	Ring finger protein 213b. (3487 aa)
	ENSKMAP00000001618	zf-C3HC4 domain-containing protein. (145 aa)
	LOC108231877	Si:ch211-113e8.10. (769 aa)
	LOC108249566	Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
	LOC108230862	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (516 aa)
	traf3ip2	SEFIR domain-containing protein. (439 aa)
	ENSKMAP00000019873	UBIQUITIN_CONJUGAT_2 domain-containing protein. (144 aa)
	rnf4	RING-type domain-containing protein. (198 aa)
	LOC108240216	TRAF3 interacting protein 2-like. (436 aa)
	LOC108231686	E3 ubiquitin-protein ligase. (868 aa)
	ube2g1	Ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
	LOC108235081	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	LOC108249386	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (560 aa)
	LOC108238169	Si:ch211-81a5.1. (299 aa)
	UBE2O	Ubiquitin conjugating enzyme E2 O. (1271 aa)
	ENSKMAP00000029729	TMEM189_B_dmain domain-containing protein. (156 aa)
	rnf152	Ring finger protein 152. (211 aa)
	rnf8	E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (515 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BFAR	ENSKMAP00000019873	ENSKMAP00000013211	ENSKMAP00000019873	Bifunctional apoptosis regulator.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.432
BFAR	ENSKMAP00000029729	ENSKMAP00000013211	ENSKMAP00000029729	Bifunctional apoptosis regulator.	TMEM189_B_dmain domain-containing protein.	0.456
BFAR	LOC108249566	ENSKMAP00000013211	ENSKMAP00000024356	Bifunctional apoptosis regulator.	Ubiquitin-conjugating enzyme E2 variant 1.	0.456
BFAR	rnf8	ENSKMAP00000013211	ENSKMAP00000024948	Bifunctional apoptosis regulator.	E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...]	0.525
BFAR	ube2v2	ENSKMAP00000013211	ENSKMAP00000006860	Bifunctional apoptosis regulator.	Ubiquitin-conjugating enzyme E2 variant 2.	0.432
ENSKMAP00000001618	ENSKMAP00000029729	ENSKMAP00000001618	ENSKMAP00000029729	zf-C3HC4 domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.674
ENSKMAP00000001618	LOC108230862	ENSKMAP00000001618	ENSKMAP00000022898	zf-C3HC4 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.607
ENSKMAP00000001618	LOC108235081	ENSKMAP00000001618	ENSKMAP00000018377	zf-C3HC4 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.470
ENSKMAP00000001618	LOC108240216	ENSKMAP00000001618	ENSKMAP00000019270	zf-C3HC4 domain-containing protein.	TRAF3 interacting protein 2-like.	0.490
ENSKMAP00000001618	LOC108244062	ENSKMAP00000001618	ENSKMAP00000007871	zf-C3HC4 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.607
ENSKMAP00000001618	LOC108249566	ENSKMAP00000001618	ENSKMAP00000024356	zf-C3HC4 domain-containing protein.	Ubiquitin-conjugating enzyme E2 variant 1.	0.674
ENSKMAP00000001618	LOC108249884	ENSKMAP00000001618	ENSKMAP00000013867	zf-C3HC4 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.607
ENSKMAP00000001618	traf3ip2	ENSKMAP00000001618	ENSKMAP00000021450	zf-C3HC4 domain-containing protein.	SEFIR domain-containing protein.	0.490
ENSKMAP00000001618	traf6	ENSKMAP00000001618	ENSKMAP00000004164	zf-C3HC4 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.911
ENSKMAP00000001618	ube2n	ENSKMAP00000001618	ENSKMAP00000006002	zf-C3HC4 domain-containing protein.	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.470
ENSKMAP00000019873	BFAR	ENSKMAP00000019873	ENSKMAP00000013211	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Bifunctional apoptosis regulator.	0.432
ENSKMAP00000019873	ENSKMAP00000029729	ENSKMAP00000019873	ENSKMAP00000029729	UBIQUITIN_CONJUGAT_2 domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.722
ENSKMAP00000019873	LOC108235011	ENSKMAP00000019873	ENSKMAP00000009743	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.735
ENSKMAP00000019873	LOC108235081	ENSKMAP00000019873	ENSKMAP00000018377	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.939
ENSKMAP00000019873	LOC108249566	ENSKMAP00000019873	ENSKMAP00000024356	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2 variant 1.	0.511