13 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ccnt1	Cyclin T1; Belongs to the cyclin family. (699 aa)
	cdk13	Cyclin-dependent kinase 13. (1417 aa)
	ccnt2	Cyclin T2; Belongs to the cyclin family. (718 aa)
	gtf2h3	General transcription factor IIH, polypeptide 3. (299 aa)
	cdk12	Cyclin-dependent kinase 12. (1356 aa)
	gtf2h1	General transcription factor IIH, polypeptide 1. (409 aa)
	ENSKMAP00000028503	PH_TFIIH domain-containing protein. (131 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
	ccnh	Cyclin H; Belongs to the cyclin family. (333 aa)
	cdk9	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
	gtf2h5	General transcription factor IIH, polypeptide 5. (71 aa)
	ENSKMAP00000017834	CYCLIN domain-containing protein; Belongs to the cyclin family. (186 aa)
	ENSKMAP00000017863	Cyclin T2b. (410 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000017834	ENSKMAP00000017863	ENSKMAP00000017834	ENSKMAP00000017863	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin T2b.	0.900
ENSKMAP00000017834	ccnh	ENSKMAP00000017834	ENSKMAP00000006920	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin H; Belongs to the cyclin family.	0.681
ENSKMAP00000017834	cdk12	ENSKMAP00000017834	ENSKMAP00000027729	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 12.	0.806
ENSKMAP00000017834	cdk13	ENSKMAP00000017834	ENSKMAP00000024468	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 13.	0.806
ENSKMAP00000017834	cdk9	ENSKMAP00000017834	ENSKMAP00000007518	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.927
ENSKMAP00000017834	gtf2h3	ENSKMAP00000017834	ENSKMAP00000026350	CYCLIN domain-containing protein; Belongs to the cyclin family.	General transcription factor IIH, polypeptide 3.	0.519
ENSKMAP00000017834	gtf2h4	ENSKMAP00000017834	ENSKMAP00000001923	CYCLIN domain-containing protein; Belongs to the cyclin family.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.493
ENSKMAP00000017863	ENSKMAP00000017834	ENSKMAP00000017863	ENSKMAP00000017834	Cyclin T2b.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.900
ENSKMAP00000017863	ccnh	ENSKMAP00000017863	ENSKMAP00000006920	Cyclin T2b.	Cyclin H; Belongs to the cyclin family.	0.681
ENSKMAP00000017863	cdk12	ENSKMAP00000017863	ENSKMAP00000027729	Cyclin T2b.	Cyclin-dependent kinase 12.	0.806
ENSKMAP00000017863	cdk13	ENSKMAP00000017863	ENSKMAP00000024468	Cyclin T2b.	Cyclin-dependent kinase 13.	0.806
ENSKMAP00000017863	cdk9	ENSKMAP00000017863	ENSKMAP00000007518	Cyclin T2b.	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.	0.927
ENSKMAP00000017863	gtf2h3	ENSKMAP00000017863	ENSKMAP00000026350	Cyclin T2b.	General transcription factor IIH, polypeptide 3.	0.519
ENSKMAP00000017863	gtf2h4	ENSKMAP00000017863	ENSKMAP00000001923	Cyclin T2b.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.493
ENSKMAP00000028503	ccnh	ENSKMAP00000028503	ENSKMAP00000006920	PH_TFIIH domain-containing protein.	Cyclin H; Belongs to the cyclin family.	0.968
ENSKMAP00000028503	gtf2h1	ENSKMAP00000028503	ENSKMAP00000028496	PH_TFIIH domain-containing protein.	General transcription factor IIH, polypeptide 1.	0.965
ENSKMAP00000028503	gtf2h3	ENSKMAP00000028503	ENSKMAP00000026350	PH_TFIIH domain-containing protein.	General transcription factor IIH, polypeptide 3.	0.980
ENSKMAP00000028503	gtf2h4	ENSKMAP00000028503	ENSKMAP00000001923	PH_TFIIH domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.980
ENSKMAP00000028503	gtf2h5	ENSKMAP00000028503	ENSKMAP00000011911	PH_TFIIH domain-containing protein.	General transcription factor IIH, polypeptide 5.	0.690
ccnh	ENSKMAP00000017834	ENSKMAP00000006920	ENSKMAP00000017834	Cyclin H; Belongs to the cyclin family.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.681