STRINGSTRING
mettl3 mettl3 Cdkn2c Cdkn2c lig4 lig4 znrf3 znrf3 arih2 arih2 ETV6 ETV6 LOC108238827 LOC108238827 mecom mecom sfrp2 sfrp2 brca2 brca2 LOC108240034 LOC108240034 fgf2 fgf2 LOC108228916 LOC108228916 ythdf2 ythdf2 cep120 cep120 xrcc5 xrcc5 fgf4 fgf4 rnf43 rnf43 nf1 nf1 ism1 ism1 LOC108228374 LOC108228374 kdf1 kdf1 ercc2 ercc2 bysl bysl trim71 trim71
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mettl3Methyltransferase like 3; Belongs to the MT-A70-like family. (592 aa)
Cdkn2cCyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4). (159 aa)
lig4DNA ligase. (922 aa)
znrf3Zinc and ring finger 3. (896 aa)
arih2RBR-type E3 ubiquitin transferase. (508 aa)
ETV6ETS variant 6. (468 aa)
LOC108238827Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (140 aa)
mecomMDS1 and EVI1 complex locus. (1256 aa)
sfrp2Secreted frizzled-related protein 2. (308 aa)
brca2BRCA2 DNA repair associated. (2641 aa)
LOC108240034Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (190 aa)
fgf2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (155 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
ythdf2YTH N(6)-methyladenosine RNA binding protein 2. (639 aa)
cep120Centrosomal protein 120. (939 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (725 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (221 aa)
rnf43RING-type domain-containing protein. (809 aa)
nf1Neurofibromin 1b. (2727 aa)
ism1Isthmin 1. (447 aa)
LOC108228374FZ domain-containing protein. (285 aa)
kdf1Keratinocyte differentiation factor 1a. (356 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
byslBystin-like. (439 aa)
trim71Tripartite motif containing 71, E3 ubiquitin protein ligase. (828 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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