STRINGSTRING
LOC108242789 LOC108242789 pax5 pax5 LOC108248927 LOC108248927 LOC108249631 LOC108249631 tcf21 tcf21 ENSKMAP00000015205 ENSKMAP00000015205 pax8 pax8 LOC108245037 LOC108245037
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108242789Paired box 2a. (417 aa)
pax5Paired box 5. (386 aa)
LOC108248927T-box transcription factor Ta. (422 aa)
LOC108249631Paired box 2b. (391 aa)
tcf21Transcription factor 21. (179 aa)
ENSKMAP00000015205Paired domain-containing protein. (150 aa)
pax8Paired box 8. (508 aa)
LOC108245037Odd-skipped related transcription factor 1. (268 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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