STRINGSTRING
pkd2 pkd2 pax5 pax5 cfap298 cfap298 invs invs pax8 pax8 efhc2 efhc2 ENSKMAP00000015205 ENSKMAP00000015205 ahi1 ahi1 LOC108249631 LOC108249631 ttc26 ttc26 bbs5 bbs5 LOC108242789 LOC108242789 nek8 nek8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pkd2Polycystic kidney disease 2. (911 aa)
pax5Paired box 5. (386 aa)
cfap298Cilia and flagella associated protein 298. (290 aa)
invsInversin. (667 aa)
pax8Paired box 8. (508 aa)
efhc2EF-hand domain (C-terminal) containing 2. (734 aa)
ENSKMAP00000015205Paired domain-containing protein. (150 aa)
ahi1Abelson helper integration site 1. (1195 aa)
LOC108249631Paired box 2b. (391 aa)
ttc26Tetratricopeptide repeat domain 26. (274 aa)
bbs5Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (342 aa)
LOC108242789Paired box 2a. (417 aa)
nek8NIMA-related kinase 8. (703 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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