31 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108229807	Cullin 4A; Belongs to the cullin family. (746 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (869 aa)
	cop1	COP1 E3 ubiquitin ligase. (708 aa)
	trpc4ap	Transient receptor potential cation channel, subfamily C, member 4 associated protein a. (775 aa)
	dcaf8	DDB1 and CUL4 associated factor 8. (613 aa)
	wdtc1	WD and tetratricopeptide repeats 1. (670 aa)
	ddb2	Damage-specific DNA binding protein 2. (497 aa)
	LOC108244955	LisH domain-containing protein. (1493 aa)
	crbn	Cereblon. (448 aa)
	dcaf12	DDB1 and CUL4 associated factor 12. (435 aa)
	dcaf4	WD repeat domain 21. (503 aa)
	dcaf11	DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family. (542 aa)
	dcaf15	DDB1 and CUL4 associated factor 15. (640 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (621 aa)
	DCAF1	DDB1 and CUL4 associated factor 1. (1564 aa)
	ambra1	Autophagy/beclin-1 regulator 1b. (1225 aa)
	fbxw5	F-box and WD repeat domain containing 5. (611 aa)
	det1	DET1 partner of COP1 E3 ubiquitin ligase. (551 aa)
	dcaf17	Ddb1 and cul4 associated factor 17. (509 aa)
	DDA1	DET1 and DDB1 associated 1. (103 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	dcaf5	Ddb1 and cul4 associated factor 5. (745 aa)
	dcaf10	WD repeat domain 32. (516 aa)
	ercc8	Excision repair cross-complementation group 8. (401 aa)
	DCAF7	DDB1 and CUL4 associated factor 7. (342 aa)
	LOC108234347	DET1 and DDB1 associated 1. (102 aa)
	ENSKMAP00000005141	Si:ch211-51h9.7. (135 aa)
	ddb1	Damage-specific DNA binding protein 1. (1075 aa)
	dcaf13	Ddb1 and cul4 associated factor 13. (445 aa)
	glmn	Glomulin, FKBP associated protein a. (600 aa)
	dcaf6	Ddb1 and cul4 associated factor 6. (975 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCAF1	DDA1	ENSKMAP00000023401	ENSKMAP00000020918	DDB1 and CUL4 associated factor 1.	DET1 and DDB1 associated 1.	0.591
DCAF1	LOC108229807	ENSKMAP00000023401	ENSKMAP00000029593	DDB1 and CUL4 associated factor 1.	Cullin 4A; Belongs to the cullin family.	0.771
DCAF1	LOC108234347	ENSKMAP00000023401	ENSKMAP00000005416	DDB1 and CUL4 associated factor 1.	DET1 and DDB1 associated 1.	0.591
DCAF1	cul4b	ENSKMAP00000023401	ENSKMAP00000000480	DDB1 and CUL4 associated factor 1.	Cullin 4B; Belongs to the cullin family.	0.771
DCAF1	ddb1	ENSKMAP00000023401	ENSKMAP00000003119	DDB1 and CUL4 associated factor 1.	Damage-specific DNA binding protein 1.	0.922
DCAF1	dtl	ENSKMAP00000023401	ENSKMAP00000024301	DDB1 and CUL4 associated factor 1.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.489
DCAF1	rbx1	ENSKMAP00000023401	ENSKMAP00000020413	DDB1 and CUL4 associated factor 1.	Ring-box 1, E3 ubiquitin protein ligase.	0.883
DCAF7	DDA1	ENSKMAP00000012769	ENSKMAP00000020918	DDB1 and CUL4 associated factor 7.	DET1 and DDB1 associated 1.	0.633
DCAF7	LOC108229807	ENSKMAP00000012769	ENSKMAP00000029593	DDB1 and CUL4 associated factor 7.	Cullin 4A; Belongs to the cullin family.	0.808
DCAF7	LOC108234347	ENSKMAP00000012769	ENSKMAP00000005416	DDB1 and CUL4 associated factor 7.	DET1 and DDB1 associated 1.	0.633
DCAF7	cul4b	ENSKMAP00000012769	ENSKMAP00000000480	DDB1 and CUL4 associated factor 7.	Cullin 4B; Belongs to the cullin family.	0.808
DCAF7	dcaf10	ENSKMAP00000012769	ENSKMAP00000019900	DDB1 and CUL4 associated factor 7.	WD repeat domain 32.	0.672
DCAF7	dcaf11	ENSKMAP00000012769	ENSKMAP00000025452	DDB1 and CUL4 associated factor 7.	DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.	0.745
DCAF7	dcaf4	ENSKMAP00000012769	ENSKMAP00000025843	DDB1 and CUL4 associated factor 7.	WD repeat domain 21.	0.686
DCAF7	ddb1	ENSKMAP00000012769	ENSKMAP00000003119	DDB1 and CUL4 associated factor 7.	Damage-specific DNA binding protein 1.	0.955
DCAF7	ddb2	ENSKMAP00000012769	ENSKMAP00000027206	DDB1 and CUL4 associated factor 7.	Damage-specific DNA binding protein 2.	0.620
DCAF7	dtl	ENSKMAP00000012769	ENSKMAP00000024301	DDB1 and CUL4 associated factor 7.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.851
DCAF7	ercc8	ENSKMAP00000012769	ENSKMAP00000019650	DDB1 and CUL4 associated factor 7.	Excision repair cross-complementation group 8.	0.856
DCAF7	rbx1	ENSKMAP00000012769	ENSKMAP00000020413	DDB1 and CUL4 associated factor 7.	Ring-box 1, E3 ubiquitin protein ligase.	0.742
DCAF7	wdtc1	ENSKMAP00000012769	ENSKMAP00000028021	DDB1 and CUL4 associated factor 7.	WD and tetratricopeptide repeats 1.	0.796