STRINGSTRING
atoh7 atoh7 vax2 vax2 vax1 vax1 LOC108239296 LOC108239296 LOC108234796 LOC108234796 LOC108241269 LOC108241269
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atoh7Atonal bHLH transcription factor 7. (133 aa)
vax2Ventral anterior homeobox 2. (307 aa)
vax1Ventral anterior homeobox 1. (310 aa)
LOC108239296Parvalbumin 8; Belongs to the parvalbumin family. (109 aa)
LOC108234796RNA binding protein, mRNA processing factor 2b. (287 aa)
LOC108241269EF-hand domain-containing protein; Belongs to the parvalbumin family. (110 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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