STRINGSTRING
sap30bp sap30bp JDP2 JDP2 prkaa2 prkaa2 pink1 pink1 sgf29 sgf29 fnta fnta yeats2 yeats2 LOC108250440 LOC108250440 brms1 brms1 LOC108234889 LOC108234889 LOC108228916 LOC108228916 sirt1 sirt1 rrp8 rrp8 prkaa1 prkaa1 dr1 dr1 mbip mbip LOC108242495 LOC108242495 TPPP TPPP lrrk2 lrrk2 ep300 ep300 sdr16c5 sdr16c5 kat14 kat14 zzz3 zzz3 tada2a tada2a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sap30bpSAP30 binding protein. (308 aa)
JDP2Jun dimerization protein 2. (198 aa)
prkaa2Non-specific serine/threonine protein kinase. (557 aa)
pink1PTEN induced kinase 1. (576 aa)
sgf29SAGA complex associated factor 29. (294 aa)
fntaFarnesyltransferase, CAAX box, alpha. (387 aa)
yeats2YEATS domain containing 2. (1430 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
brms1BRMS1 transcriptional repressor and anoikis regulator. (277 aa)
LOC108234889Zinc finger protein 703. (586 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
sirt1Sirtuin 1. (693 aa)
rrp8Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (555 aa)
prkaa1Non-specific serine/threonine protein kinase. (573 aa)
dr1Down-regulator of transcription 1. (176 aa)
mbipMAP3K12 binding inhibitory protein 1. (336 aa)
LOC108242495Jun dimerization protein 2b. (163 aa)
TPPPTubulin polymerization promoting protein. (237 aa)
lrrk2Leucine-rich repeat kinase 2. (2550 aa)
ep300E1A binding protein p300 b. (2785 aa)
sdr16c5Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
kat14Lysine acetyltransferase 14. (793 aa)
zzz3Zinc finger, ZZ-type containing 3. (1194 aa)
tada2aTranscriptional adapter. (445 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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