STRINGSTRING
taf12 taf12 LOC108246458 LOC108246458 ddit3 ddit3 LOC108237920 LOC108237920 LOC108236077 LOC108236077 LOC108237917 LOC108237917 taf1 taf1 ENSKMAP00000015600 ENSKMAP00000015600 cebpa cebpa LOC108249350 LOC108249350 LOC108241555 LOC108241555 gtf2a2 gtf2a2 LOC108231541 LOC108231541 taf5l taf5l taf11 taf11 LOC108228999 LOC108228999 nfyb nfyb LOC108241257 LOC108241257 LOC108247541 LOC108247541 e2f2 e2f2 med9 med9 ENSKMAP00000012240 ENSKMAP00000012240 nkx2-5 nkx2-5 gtf2h5 gtf2h5 LOC108245229 LOC108245229 ENSKMAP00000011188 ENSKMAP00000011188 taf6 taf6 trrap trrap nr5a1 nr5a1 LOC108235010 LOC108235010 nr5a2 nr5a2 supt3h supt3h LOC108249820 LOC108249820 ENSKMAP00000009511 ENSKMAP00000009511 LOC108246380 LOC108246380 LOC108251031 LOC108251031 Pou2af1 Pou2af1 LOC108246331 LOC108246331 atf7 atf7 arntl arntl e2f1 e2f1 hlf hlf LOC108250437 LOC108250437 mnat1 mnat1 taf6l taf6l clock clock LOC108247432 LOC108247432 LOC108235544 LOC108235544 med4 med4 rfxap rfxap LOC108235931 LOC108235931 smad9 smad9 rfxank rfxank LOC112450151 LOC112450151 cebpd cebpd ccnh ccnh JUND JUND LOC108239981 LOC108239981 tcf7l1 tcf7l1 med14 med14 nfyc nfyc LOC108238846 LOC108238846 ascc2 ascc2 taf3 taf3 med8 med8 smad1 smad1 hltf hltf drap1 drap1 fosl2 fosl2 LOC108236993 LOC108236993 gemin5 gemin5 gtf2a1 gtf2a1 bcl9l bcl9l HAND1 HAND1 CREB1 CREB1 fosl1 fosl1 LOC108233178 LOC108233178 med17 med17 nr1h3 nr1h3 gtf2b gtf2b nfatc2 nfatc2 LOC108239928 LOC108239928 taf8 taf8 xbp1 xbp1 ENSKMAP00000002577 ENSKMAP00000002577 lef1 lef1 ENSKMAP00000001971 ENSKMAP00000001971 gtf2h4 gtf2h4 LOC108243306 LOC108243306 taf7l taf7l cebpz cebpz trip4 trip4 LOC108245055 LOC108245055 atf6 atf6 LOC108240442 LOC108240442 MAX MAX gtf2f1 gtf2f1 LOC108230807 LOC108230807 ENSKMAP00000001391 ENSKMAP00000001391 ENSKMAP00000001367 ENSKMAP00000001367 tfdp1 tfdp1 gtf2e2 gtf2e2 ENSKMAP00000000371 ENSKMAP00000000371 ENSKMAP00000000365 ENSKMAP00000000365 ENSKMAP00000000323 ENSKMAP00000000323 ASCL4 ASCL4 TAF4 TAF4 taf10 taf10 dr1 dr1 med18 med18 cbfb cbfb rb1 rb1 ascl1 ascl1 LOC108250675 LOC108250675 med31 med31 LOC108242442 LOC108242442 ENSKMAP00000019141 ENSKMAP00000019141 ENSKMAP00000019655 ENSKMAP00000019655 LOC108228382 LOC108228382 smad2 smad2 atf3 atf3 gtf2e1 gtf2e1 med6 med6 atf2 atf2 LOC108243741 LOC108243741 MED26 MED26 nfe2l2 nfe2l2 stat4 stat4 LOC108244831 LOC108244831 LOC108241994 LOC108241994 LOC108242566 LOC108242566 gtf2a1l gtf2a1l rxra rxra tcf7l2 tcf7l2 med1 med1 nfya nfya ENSKMAP00000023670 ENSKMAP00000023670 LOC108246113 LOC108246113 LOC108240251 LOC108240251 LOC108235574 LOC108235574 LOC108235808 LOC108235808 ASCL5 ASCL5 bcl9 bcl9 ENSKMAP00000025230 ENSKMAP00000025230 LOC108242668 LOC108242668 MAFG MAFG LOC108235753 LOC108235753 E2F3 E2F3 gtf2h3 gtf2h3 smad6 smad6 smad3 smad3 tcf7 tcf7 stat3 stat3 taf2 taf2 e2f8 e2f8 tbp tbp max max LOC108244970 LOC108244970 Nfe2 Nfe2 gtf2h1 gtf2h1 ENSKMAP00000028503 ENSKMAP00000028503 taf5 taf5 SMAD4 SMAD4 RXRB RXRB ercc2 ercc2 e2f4 e2f4 LOC108243859 LOC108243859 gtf2f2 gtf2f2 ercc3 ercc3 LOC108236308 LOC108236308 LOC108232507 LOC108232507 LOC108241552 LOC108241552 rfx5 rfx5 LOC108233549 LOC108233549
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (160 aa)
LOC108246458Uncharacterized protein. (459 aa)
ddit3DNA-damage-inducible transcript 3. (306 aa)
LOC108237920Mothers against decapentaplegic homolog. (521 aa)
LOC108236077JunB proto-oncogene, AP-1 transcription factor subunit b. (306 aa)
LOC108237917Mothers against decapentaplegic homolog. (425 aa)
taf1Transcription initiation factor TFIID subunit. (1824 aa)
ENSKMAP00000015600CCAAT enhancer binding protein gamma. (139 aa)
cebpaCCAAT/enhancer-binding protein. (289 aa)
LOC108249350BTB and CNC homology 1, basic leucine zipper transcription factor 2b. (665 aa)
LOC108241555Pygopus homolog 2 (Drosophila). (592 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
LOC108231541Activating transcription factor 4a. (448 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
LOC108228999Mothers against decapentaplegic homolog. (553 aa)
nfybNuclear transcription factor Y, beta a. (204 aa)
LOC108241257V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ga. (210 aa)
LOC108247541Mothers against decapentaplegic homolog. (503 aa)
e2f2Si:ch211-160f23.5. (450 aa)
med9Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (100 aa)
ENSKMAP00000012240E2F_TDP domain-containing protein. (79 aa)
nkx2-5NK2 homeobox 5. (302 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
LOC108245229Activating transcription factor 5a. (505 aa)
ENSKMAP00000011188Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
trrapTransformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (3820 aa)
nr5a1Nuclear receptor subfamily 5, group A, member 1a. (473 aa)
LOC108235010Mothers against decapentaplegic homolog. (467 aa)
nr5a2Uncharacterized protein. (524 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (346 aa)
LOC108249820HMG box domain-containing protein. (254 aa)
ENSKMAP00000009511BZIP domain-containing protein. (107 aa)
LOC108246380BZIP domain-containing protein. (698 aa)
LOC108251031TAFH domain-containing protein. (933 aa)
Pou2af1Uncharacterized protein. (198 aa)
LOC108246331Activating transcription factor 5b. (504 aa)
atf7Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (504 aa)
arntlUncharacterized protein. (630 aa)
e2f1E2F transcription factor 1. (452 aa)
hlfHLF transcription factor, PAR bZIP family member b. (297 aa)
LOC108250437Mothers against decapentaplegic homolog. (472 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (639 aa)
clockUncharacterized protein. (741 aa)
LOC108247432Neuronal PAS domain protein 2. (811 aa)
LOC108235544D site albumin promoter binding protein b. (368 aa)
med4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (253 aa)
rfxapRegulatory factor X-associated protein. (215 aa)
LOC108235931BTB and CNC homology 1, basic leucine zipper transcription factor 1 a. (649 aa)
smad9Mothers against decapentaplegic homolog. (468 aa)
rfxankRegulatory factor X-associated ankyrin-containing protein. (226 aa)
LOC112450151Uncharacterized protein. (205 aa)
cebpdCCAAT enhancer binding protein delta. (282 aa)
ccnhCyclin H; Belongs to the cyclin family. (333 aa)
JUNDBZIP domain-containing protein. (292 aa)
LOC108239981Aryl hydrocarbon receptor nuclear translocator-like 2 protein. (638 aa)
tcf7l1Transcription factor 7 like 1b. (580 aa)
med14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1435 aa)
nfycNuclear transcription factor Y, gamma. (356 aa)
LOC108238846Uncharacterized protein. (331 aa)
ascc2Activating signal cointegrator 1 complex subunit 2. (761 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (982 aa)
med8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
smad1Mothers against decapentaplegic homolog. (467 aa)
hltfHelicase-like transcription factor. (930 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (227 aa)
fosl2Fos-like antigen 2. (348 aa)
LOC108236993Uncharacterized protein. (729 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1430 aa)
gtf2a1General transcription factor IIA, 1. (385 aa)
bcl9lBcl9 like. (1494 aa)
HAND1Heart and neural crest derivatives expressed 1. (166 aa)
CREB1cAMP responsive element binding protein 1. (317 aa)
fosl1FOS-like antigen 1a. (331 aa)
LOC108233178V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. (380 aa)
med17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (643 aa)
nr1h3Nuclear receptor subfamily 1, group H, member 3. (464 aa)
gtf2bGeneral transcription factor IIB. (224 aa)
nfatc2Nuclear factor of activated T cells 2a. (888 aa)
LOC108239928Achaete-scute family bHLH transcription factor 1b. (191 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
xbp1X-box binding protein 1. (263 aa)
ENSKMAP00000002577SH2 domain-containing protein. (195 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
ENSKMAP00000001971THAP-type domain-containing protein. (361 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
LOC108243306TAFH domain-containing protein. (1037 aa)
taf7lTAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
cebpzCCAAT enhancer binding protein zeta. (1048 aa)
trip4Thyroid hormone receptor interactor 4. (570 aa)
LOC108245055Uncharacterized protein. (697 aa)
atf6Activating transcription factor 6. (647 aa)
LOC108240442General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (261 aa)
MAXMYC associated factor X. (150 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
LOC108230807Uncharacterized protein. (453 aa)
ENSKMAP00000001391E2F_TDP domain-containing protein. (110 aa)
ENSKMAP00000001367E2F_CC-MB domain-containing protein. (180 aa)
tfdp1Transcription factor. (412 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
ENSKMAP00000000371E2F transcription factor 5. (163 aa)
ENSKMAP00000000365PAS domain-containing protein. (297 aa)
ENSKMAP00000000323E2F_TDP domain-containing protein. (85 aa)
ASCL4Achaete-scute family bHLH transcription factor 4. (239 aa)
TAF4TATA-box binding protein associated factor 4. (894 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (188 aa)
dr1Down-regulator of transcription 1. (176 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (209 aa)
cbfbCore-binding factor subunit beta. (188 aa)
rb1Retinoblastoma 1. (915 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (206 aa)
LOC108250675TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (274 aa)
med31Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (148 aa)
LOC108242442Si:ch211-153j24.3. (377 aa)
ENSKMAP00000019141BZIP domain-containing protein. (114 aa)
ENSKMAP00000019655Mothers against decapentaplegic homolog. (340 aa)
LOC108228382JunE proto-oncogene, AP-1 transcription factor subunit. (332 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
atf3Activating transcription factor 3. (224 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (446 aa)
med6Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (246 aa)
atf2Activating transcription factor 2. (515 aa)
LOC108243741Nuclear receptor subfamily 5, group A, member 5. (527 aa)
MED26Mediator complex subunit 26. (605 aa)
nfe2l2Nuclear factor, erythroid 2-like 2a. (613 aa)
stat4Signal transducer and activator of transcription. (738 aa)
LOC108244831JunD proto-oncogene, AP-1 transcription factor subunit. (269 aa)
LOC108241994Retinoid x receptor, beta b. (427 aa)
LOC108242566HMG box domain-containing protein. (580 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (427 aa)
rxraRetinoid X receptor, alpha a. (496 aa)
tcf7l2Transcription factor 7 like 2. (630 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
nfyaNuclear transcription factor Y, alpha, like. (348 aa)
ENSKMAP00000023670TAF4 domain-containing protein. (300 aa)
LOC108246113Activity-dependent neuroprotector homeobox b. (1064 aa)
LOC108240251THAP-type domain-containing protein. (372 aa)
LOC108235574Activating transcription factor 1. (311 aa)
LOC108235808Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (415 aa)
ASCL5Achaete-scute family bHLH transcription factor 5. (172 aa)
bcl9BCL9 transcription coactivator. (1492 aa)
ENSKMAP00000025230BZIP domain-containing protein. (129 aa)
LOC108242668D site albumin promoter binding protein a. (374 aa)
MAFGMAF bZIP transcription factor G. (211 aa)
LOC108235753Signal transducer and activator of transcription. (802 aa)
E2F3E2F transcription factor 3. (441 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (299 aa)
smad6Mothers against decapentaplegic homolog. (484 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
tcf7Transcription factor 7. (384 aa)
stat3Signal transducer and activator of transcription. (787 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1215 aa)
e2f8E2F transcription factor 8. (864 aa)
tbpTATA box binding protein. (304 aa)
maxMyc associated factor X. (166 aa)
LOC108244970E2F transcription factor 7. (615 aa)
Nfe2Nuclear factor, erythroid 2. (432 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (409 aa)
ENSKMAP00000028503PH_TFIIH domain-containing protein. (131 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (749 aa)
SMAD4Mothers against decapentaplegic homolog. (457 aa)
RXRBRetinoid X receptor beta. (469 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
e2f4E2F transcription factor 4. (388 aa)
LOC108243859Uncharacterized protein. (313 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
LOC108236308JunB proto-oncogene, AP-1 transcription factor subunit a. (331 aa)
LOC108232507General transcription factor IIH subunit. (392 aa)
LOC108241552Clock circadian regulator b. (899 aa)
rfx5Regulatory factor X, 5. (695 aa)
LOC108233549cAMP responsive element binding protein 3-like 3 like. (493 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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