STRINGSTRING
prpf8 prpf8 LOC108237959 LOC108237959 LOC108250440 LOC108250440 rbm41 rbm41 LOC108242029 LOC108242029 ep300 ep300 rnpc3 rnpc3 RBM20 RBM20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prpf8Pre-mRNA processing factor 8. (2342 aa)
LOC108237959RNA binding motif protein 24a. (251 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
rbm41RNA binding motif protein 41. (421 aa)
LOC108242029RNA binding motif protein 24b. (210 aa)
ep300E1A binding protein p300 b. (2785 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (492 aa)
RBM20RNA binding motif protein 20. (1097 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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