20 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108233149	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	sh2b3	SH2B adaptor protein 3. (726 aa)
	atp6ap1	ATPase H+ transporting accessory protein 1b. (468 aa)
	LOC108237634	Tyrosine-protein kinase. (549 aa)
	gp1bb	Glycoprotein Ib platelet subunit beta. (207 aa)
	LOC108245125	TNF superfamily member 11; Belongs to the tumor necrosis factor family. (264 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	LOC108238304	Abl-interactor 1b. (495 aa)
	ptpn6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (608 aa)
	LOC108237229	Fam20C domain-containing protein. (581 aa)
	LOC108229763	Uncharacterized protein. (432 aa)
	srf	Serum response factor b. (596 aa)
	LOC108251136	MADS-box domain-containing protein. (494 aa)
	ENSKMAP00000018594	Glycoprotein IX (platelet). (249 aa)
	SRC	Tyrosine-protein kinase. (550 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (596 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
	ABI1	Abl-interactor 1a. (558 aa)
	LOC108239179	FAM20C golgi associated secretory pathway kinase a. (585 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABI1	LOC108238304	ENSKMAP00000024862	ENSKMAP00000010041	Abl-interactor 1a.	Abl-interactor 1b.	0.901
ENSKMAP00000018594	gp1bb	ENSKMAP00000018594	ENSKMAP00000004572	Glycoprotein IX (platelet).	Glycoprotein Ib platelet subunit beta.	0.886
LOC108233149	LOC108237634	ENSKMAP00000007317	ENSKMAP00000002899	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.540
LOC108233149	SRC	ENSKMAP00000007317	ENSKMAP00000019871	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.540
LOC108233149	ptpn11	ENSKMAP00000007317	ENSKMAP00000020601	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.901
LOC108237634	LOC108233149	ENSKMAP00000002899	ENSKMAP00000007317	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.540
LOC108237634	SRC	ENSKMAP00000002899	ENSKMAP00000019871	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.901
LOC108237634	ptpn11	ENSKMAP00000002899	ENSKMAP00000020601	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.540
LOC108237634	ptpn6	ENSKMAP00000002899	ENSKMAP00000010521	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.478
LOC108238304	ABI1	ENSKMAP00000010041	ENSKMAP00000024862	Abl-interactor 1b.	Abl-interactor 1a.	0.901
LOC108250440	med1	ENSKMAP00000008734	ENSKMAP00000023121	E1A binding protein p300 a.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.683
LOC108251136	srf	ENSKMAP00000013538	ENSKMAP00000013161	MADS-box domain-containing protein.	Serum response factor b.	0.902
SRC	LOC108233149	ENSKMAP00000019871	ENSKMAP00000007317	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.540
SRC	LOC108237634	ENSKMAP00000019871	ENSKMAP00000002899	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.901
SRC	ptpn11	ENSKMAP00000019871	ENSKMAP00000020601	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.540
SRC	ptpn6	ENSKMAP00000019871	ENSKMAP00000010521	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.478
ep300	med1	ENSKMAP00000020640	ENSKMAP00000023121	E1A binding protein p300 b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.683
gp1bb	ENSKMAP00000018594	ENSKMAP00000004572	ENSKMAP00000018594	Glycoprotein Ib platelet subunit beta.	Glycoprotein IX (platelet).	0.886
med1	LOC108250440	ENSKMAP00000023121	ENSKMAP00000008734	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	E1A binding protein p300 a.	0.683
med1	ep300	ENSKMAP00000023121	ENSKMAP00000020640	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	E1A binding protein p300 b.	0.683