(42 nodes) Regulation of postsynapse organization network (Kryptolebias marmoratus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108241326	BAI1-associated protein 2a. (553 aa)
	ENSKMAP00000016720	Apolipoprotein Eb. (264 aa)
	LOC108234609	Homer scaffold protein 1b. (374 aa)
	lrrk2	Leucine-rich repeat kinase 2. (2550 aa)
	LOC108240218	Ubiquitin protein ligase E3A. (818 aa)
	LOC108242507	Uncharacterized protein. (508 aa)
	lrrtm2	Leucine rich repeat transmembrane neuronal 2. (546 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1105 aa)
	arhgap22	Rho GTPase activating protein 22. (728 aa)
	abhd17c	Abhydrolase domain containing 17C. (294 aa)
	LOC108244397	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (804 aa)
	LOC108251412	WH1 domain-containing protein. (359 aa)
	LOC108238182	Ephrin-A1a; Belongs to the ephrin family. (224 aa)
	LOC108248181	Uncharacterized protein. (1974 aa)
	eef2k	Eukaryotic elongation factor 2 kinase. (774 aa)
	LOC108250544	Cyclin-dependent kinase-like 5. (1058 aa)
	LRFN2	Leucine rich repeat and fibronectin type III domain containing 2. (788 aa)
	vps35	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (798 aa)
	TANC2	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2. (2159 aa)
	LOC108239535	Peptidase_S9 domain-containing protein. (364 aa)
	cux2	Homeobox protein cut-like. (1540 aa)
	LOC108240018	Interleukin 1 receptor accessory protein-like 2. (656 aa)
	abhd17b	Abhydrolase domain containing 17B. (288 aa)
	LOC108231368	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (790 aa)
	LOC108250392	Apolipoprotein Ea. (251 aa)
	ENSKMAP00000006646	SH3 domain-containing protein. (514 aa)
	dbnl	Drebrin-like b. (481 aa)
	LOC108248636	SH3 domain-containing protein. (248 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	ENSKMAP00000005716	Leucine rich repeat and fibronectin type III domain containing 4b. (412 aa)
	LOC108250421	Cell cycle associated protein 1a. (635 aa)
	LOC108230834	Abhydrolase domain containing 17A. (321 aa)
	efna1	Ephrin-A1b; Belongs to the ephrin family. (233 aa)
	RELN	Reelin. (3454 aa)
	BAIAP2	BAI1 associated protein 2. (563 aa)
	caprin1	Cell cycle associated protein 1b. (683 aa)
	ENSKMAP00000001844	ANK_REP_REGION domain-containing protein. (151 aa)
	dbn1	Drebrin 1. (614 aa)
	tanc1	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b. (1921 aa)
	CDKL5	Cyclin dependent kinase like 5. (1049 aa)
	caprin2	Caprin family member 2. (891 aa)
	UBE3A	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (896 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAIAP2	LOC108241326	ENSKMAP00000002483	ENSKMAP00000015583	BAI1 associated protein 2.	BAI1-associated protein 2a.	0.901
BAIAP2	LOC108248636	ENSKMAP00000002483	ENSKMAP00000006851	BAI1 associated protein 2.	SH3 domain-containing protein.	0.723
ENSKMAP00000005716	LOC108240018	ENSKMAP00000005716	ENSKMAP00000009254	Leucine rich repeat and fibronectin type III domain containing 4b.	Interleukin 1 receptor accessory protein-like 2.	0.488
ENSKMAP00000005716	LRFN2	ENSKMAP00000005716	ENSKMAP00000012568	Leucine rich repeat and fibronectin type III domain containing 4b.	Leucine rich repeat and fibronectin type III domain containing 2.	0.404
LOC108240018	ENSKMAP00000005716	ENSKMAP00000009254	ENSKMAP00000005716	Interleukin 1 receptor accessory protein-like 2.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.488
LOC108240218	UBE3A	ENSKMAP00000020906	ENSKMAP00000016617	Ubiquitin protein ligase E3A.	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.	0.901
LOC108241326	BAIAP2	ENSKMAP00000015583	ENSKMAP00000002483	BAI1-associated protein 2a.	BAI1 associated protein 2.	0.901
LOC108241326	LOC108248636	ENSKMAP00000015583	ENSKMAP00000006851	BAI1-associated protein 2a.	SH3 domain-containing protein.	0.723
LOC108248636	BAIAP2	ENSKMAP00000006851	ENSKMAP00000002483	SH3 domain-containing protein.	BAI1 associated protein 2.	0.723
LOC108248636	LOC108241326	ENSKMAP00000006851	ENSKMAP00000015583	SH3 domain-containing protein.	BAI1-associated protein 2a.	0.723
LRFN2	ENSKMAP00000005716	ENSKMAP00000012568	ENSKMAP00000005716	Leucine rich repeat and fibronectin type III domain containing 2.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.404
UBE3A	LOC108240218	ENSKMAP00000016617	ENSKMAP00000020906	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.	Ubiquitin protein ligase E3A.	0.901
lrrk2	vps35	ENSKMAP00000019647	ENSKMAP00000011482	Leucine-rich repeat kinase 2.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.653
vps35	lrrk2	ENSKMAP00000011482	ENSKMAP00000019647	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Leucine-rich repeat kinase 2.	0.653