STRINGSTRING
ercc1 ercc1 psmc5 psmc5 ercc4 ercc4 gtf2f1 gtf2f1 drap1 drap1 taf7l taf7l LOC108249107 LOC108249107 yeats2 yeats2 LOC108237972 LOC108237972 cand1 cand1 ENSKMAP00000023793 ENSKMAP00000023793 gtf2b gtf2b gtf2a1 gtf2a1 LOC108247437 LOC108247437 LOC108233996 LOC108233996 btaf1 btaf1 LOC108228382 LOC108228382 dr1 dr1 polr1e polr1e mtor mtor brf2 brf2 ENSKMAP00000011188 ENSKMAP00000011188 nop58 nop58 ZNHIT6 ZNHIT6 gtf2a2 gtf2a2 rptor rptor taf1 taf1 taf12 taf12 ctdp1 ctdp1 ENSKMAP00000024477 ENSKMAP00000024477 ENSKMAP00000024532 ENSKMAP00000024532 LOC108244949 LOC108244949
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ercc1Excision repair cross-complementation group 1. (352 aa)
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
ercc4Excision repair cross-complementation group 4. (899 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (227 aa)
taf7lTAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
LOC108249107BRF1 RNA polymerase III transcription initiation factor subunit b. (691 aa)
yeats2YEATS domain containing 2. (1430 aa)
LOC108237972Uncharacterized protein. (666 aa)
cand1Cullin-associated and neddylation-dissociated 1. (1216 aa)
ENSKMAP00000023793Zgc:162472. (437 aa)
gtf2bGeneral transcription factor IIB. (224 aa)
gtf2a1General transcription factor IIA, 1. (385 aa)
LOC108247437Androgen receptor. (742 aa)
LOC108233996Nucleolar and coiled-body phosphoprotein 1. (927 aa)
btaf1BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1815 aa)
LOC108228382JunE proto-oncogene, AP-1 transcription factor subunit. (332 aa)
dr1Down-regulator of transcription 1. (176 aa)
polr1eRNA polymerase I subunit E. (416 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2516 aa)
brf2BRF2 RNA polymerase III transcription initiation factor subunit. (439 aa)
ENSKMAP00000011188Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
nop58NOP58 ribonucleoprotein homolog (yeast). (553 aa)
ZNHIT6Zinc finger HIT-type containing 6. (436 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
rptorRegulatory associated protein of MTOR, complex 1. (1332 aa)
taf1Transcription initiation factor TFIID subunit. (1824 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (160 aa)
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (980 aa)
ENSKMAP00000024477TFIIB-type domain-containing protein. (224 aa)
ENSKMAP00000024532TFIIB domain-containing protein. (139 aa)
LOC108244949TIP120 domain-containing protein. (1245 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.