34 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108241477	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (241 aa)
	eda	Ectodysplasin A; Belongs to the tumor necrosis factor family. (248 aa)
	pdcd4	Programmed cell death 4b. (477 aa)
	phb	Prohibitin. (271 aa)
	LOC108233514	Gremlin 1a, DAN family BMP antagonist. (173 aa)
	nod2	Nucleotide-binding oligomerization domain containing 2. (988 aa)
	trim44	Tripartite motif containing 44. (383 aa)
	LOC108242738	Interleukin-1. (244 aa)
	nmi	Uncharacterized protein. (367 aa)
	LOC108244547	C-C motif chemokine. (109 aa)
	LOC108239940	Si:ch211-219a15.3. (357 aa)
	LOC108250425	Uncharacterized protein. (715 aa)
	rc3h1	Ring finger and CCCH-type domains 1b. (1122 aa)
	ILK	Integrin linked kinase. (452 aa)
	eif2ak2	Uncharacterized protein. (667 aa)
	ccdc142	Uncharacterized protein. (1030 aa)
	ifi35	Interferon-induced protein 35. (373 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	nfat5	Nuclear factor of activated T cells 5b. (1298 aa)
	GREM1	Gremlin; Belongs to the DAN family. (172 aa)
	LOC108231198	Programmed cell death 4a. (468 aa)
	LOC108236879	Uncharacterized protein. (452 aa)
	sash1	SAM and SH3 domain containing 1a. (1360 aa)
	tcim	Transcriptional and immune response regulator a. (100 aa)
	rc3h2	Ring finger and CCCH-type domains 2. (1116 aa)
	LOC108230090	Nuclear factor of activated T cells 5a. (1448 aa)
	cunh20orf27	Si:ch211-74f19.2. (174 aa)
	LOC108231665	RanBP-type and C3HC4-type zinc finger containing 1. (517 aa)
	c1qtnf4	C1q and TNF related 4. (387 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	LOC108239093	SAM and SH3 domain containing 1b. (1104 aa)
	il18	Uncharacterized protein. (202 aa)
	nod1	Nucleotide-binding oligomerization domain containing 1. (599 aa)
	PTP4A3	Protein tyrosine phosphatase 4A3. (170 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GREM1	LOC108233514	ENSKMAP00000000656	ENSKMAP00000029949	Gremlin; Belongs to the DAN family.	Gremlin 1a, DAN family BMP antagonist.	0.902
ILK	LOC108236879	ENSKMAP00000012250	ENSKMAP00000001989	Integrin linked kinase.	Uncharacterized protein.	0.900
LOC108231665	ifi35	ENSKMAP00000018603	ENSKMAP00000010050	RanBP-type and C3HC4-type zinc finger containing 1.	Interferon-induced protein 35.	0.443
LOC108233514	GREM1	ENSKMAP00000029949	ENSKMAP00000000656	Gremlin 1a, DAN family BMP antagonist.	Gremlin; Belongs to the DAN family.	0.902
LOC108236879	ILK	ENSKMAP00000001989	ENSKMAP00000012250	Uncharacterized protein.	Integrin linked kinase.	0.900
LOC108242738	il18	ENSKMAP00000003272	ENSKMAP00000021178	Interleukin-1.	Uncharacterized protein.	0.720
LOC108250425	nod1	ENSKMAP00000008195	ENSKMAP00000022475	Uncharacterized protein.	Nucleotide-binding oligomerization domain containing 1.	0.926
eif2ak2	ifi35	ENSKMAP00000011194	ENSKMAP00000010050	Uncharacterized protein.	Interferon-induced protein 35.	0.491
ifi35	LOC108231665	ENSKMAP00000010050	ENSKMAP00000018603	Interferon-induced protein 35.	RanBP-type and C3HC4-type zinc finger containing 1.	0.443
ifi35	eif2ak2	ENSKMAP00000010050	ENSKMAP00000011194	Interferon-induced protein 35.	Uncharacterized protein.	0.491
ifi35	nmi	ENSKMAP00000010050	ENSKMAP00000004617	Interferon-induced protein 35.	Uncharacterized protein.	0.899
il18	LOC108242738	ENSKMAP00000021178	ENSKMAP00000003272	Uncharacterized protein.	Interleukin-1.	0.720
nmi	ifi35	ENSKMAP00000004617	ENSKMAP00000010050	Uncharacterized protein.	Interferon-induced protein 35.	0.899
nod1	LOC108250425	ENSKMAP00000022475	ENSKMAP00000008195	Nucleotide-binding oligomerization domain containing 1.	Uncharacterized protein.	0.926
rc3h1	rc3h2	ENSKMAP00000013660	ENSKMAP00000014588	Ring finger and CCCH-type domains 1b.	Ring finger and CCCH-type domains 2.	0.611
rc3h2	rc3h1	ENSKMAP00000014588	ENSKMAP00000013660	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1b.	0.611