73 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108247629	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2. (261 aa)
	LOC108240964	Uncharacterized protein. (240 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (869 aa)
	brd7	Bromodomain containing 7. (620 aa)
	CDKN2A	Cyclin dependent kinase inhibitor 2A. (124 aa)
	LOC108229311	Uncharacterized protein. (209 aa)
	fhl1	Four and a half LIM domains 1a. (339 aa)
	ecd	Ecdysoneless homolog (Drosophila). (706 aa)
	ENSKMAP00000002093	Polycystic kidney disease 1b. (2655 aa)
	LOC108247965	WW domain-containing protein. (525 aa)
	CTDSP1	CTD small phosphatase 1. (305 aa)
	LOC108249674	Cleavage and polyadenylation specific factor 3. (686 aa)
	LOC108249691	ADAM metallopeptidase domain 17b. (835 aa)
	ENSKMAP00000004056	Uncharacterized protein. (156 aa)
	prkdc	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4049 aa)
	fbxo31	F-box protein 31. (575 aa)
	stox1	Storkhead box 1. (1099 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
	ccnh	Cyclin H; Belongs to the cyclin family. (333 aa)
	rgcc	Regulator of cell cycle. (175 aa)
	mnat1	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
	plrg1	Pleiotropic regulator 1. (510 aa)
	e2f1	E2F transcription factor 1. (452 aa)
	LOC108236986	ADAM metallopeptidase domain 17a. (847 aa)
	casp2	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (439 aa)
	ENSKMAP00000009317	STIL centriolar assembly protein. (855 aa)
	CPSF3	Cleavage and polyadenylation specific factor 3. (690 aa)
	rfwd3	Ring finger and WD repeat domain 3. (712 aa)
	bcl7a	BAF chromatin remodeling complex subunit BCL7A. (199 aa)
	LOC108242249	Zgc:172079. (200 aa)
	mblac1	Metallo-beta-lactamase domain containing 1. (257 aa)
	Crlf3	Uncharacterized protein. (85 aa)
	id2	Inhibitor of DNA binding 2a. (139 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1037 aa)
	fbxo7	F-box protein 7. (466 aa)
	ENSKMAP00000010748	Si:ch211-137i24.10. (190 aa)
	LOC108245220	Si:ch211-137i24.10. (191 aa)
	LOC108229746	Retinoblastoma-like 2 (p130). (645 aa)
	lsm11	LSM11, U7 small nuclear RNA associated. (322 aa)
	sass6	SAS-6 centriolar assembly protein. (587 aa)
	LOC108239009	Four and a half LIM domains 1b. (280 aa)
	appl2	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (665 aa)
	ctdspl	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a. (268 aa)
	dcun1d3	DCN1-like protein. (326 aa)
	LOC108233174	Cyclin D2, b; Belongs to the cyclin family. (294 aa)
	Kmt2e	Lysine (K)-specific methyltransferase 2E. (430 aa)
	rptor	Regulatory associated protein of MTOR, complex 1. (1332 aa)
	LSM10	LSM10, U7 small nuclear RNA associated. (121 aa)
	ccnd1	Cyclin D1; Belongs to the cyclin family. (292 aa)
	pla2g4a	Phospholipase A2. (747 aa)
	bcl2	BCL2 apoptosis regulator b. (297 aa)
	rb1	Retinoblastoma 1. (915 aa)
	wac	WW domain containing adaptor with coiled-coil a. (593 aa)
	AIF1	Allograft inflammatory factor 1. (152 aa)
	ambra1	Autophagy/beclin-1 regulator 1b. (1225 aa)
	kank2	KN motif and ankyrin repeat domains 2. (1027 aa)
	appl1	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (711 aa)
	LOC108244280	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1. (262 aa)
	pkd1	Polycystic kidney disease 1a. (4448 aa)
	rbl1	Retinoblastoma-like 1 (p107). (1034 aa)
	psme1	Proteasome activator subunit 1. (250 aa)
	ino80	INO80 complex ATPase subunit. (1474 aa)
	cdkn2d	Cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4). (164 aa)
	tm4sf5	Transmembrane 4 L six family member 5. (201 aa)
	gpnmb	Glycoprotein (transmembrane) nmb. (624 aa)
	LOC108238656	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b. (263 aa)
	prmt2	Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (387 aa)
	LOC108244970	E2F transcription factor 7. (615 aa)
	LOC108229869	P53-induced death domain protein 1. (1005 aa)
	ccnd2	Cyclin D2, a; Belongs to the cyclin family. (340 aa)
	psme2	Proteasome activator subunit 2. (245 aa)
	LOC108229807	Cullin 4A; Belongs to the cullin family. (746 aa)
	Cdkn2c	Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4). (159 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDKN2A	ENSKMAP00000004056	ENSKMAP00000001588	ENSKMAP00000004056	Cyclin dependent kinase inhibitor 2A.	Uncharacterized protein.	0.500
CDKN2A	LOC108233174	ENSKMAP00000001588	ENSKMAP00000014487	Cyclin dependent kinase inhibitor 2A.	Cyclin D2, b; Belongs to the cyclin family.	0.661
CDKN2A	LOC108240964	ENSKMAP00000001588	ENSKMAP00000000463	Cyclin dependent kinase inhibitor 2A.	Uncharacterized protein.	0.531
CDKN2A	ccnd1	ENSKMAP00000001588	ENSKMAP00000017242	Cyclin dependent kinase inhibitor 2A.	Cyclin D1; Belongs to the cyclin family.	0.663
CDKN2A	ccnd2	ENSKMAP00000001588	ENSKMAP00000029094	Cyclin dependent kinase inhibitor 2A.	Cyclin D2, a; Belongs to the cyclin family.	0.661
CDKN2A	e2f1	ENSKMAP00000001588	ENSKMAP00000008865	Cyclin dependent kinase inhibitor 2A.	E2F transcription factor 1.	0.565
CDKN2A	rb1	ENSKMAP00000001588	ENSKMAP00000017673	Cyclin dependent kinase inhibitor 2A.	Retinoblastoma 1.	0.448
CPSF3	LOC108249674	ENSKMAP00000009757	ENSKMAP00000003680	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 3.	0.900
CPSF3	LSM10	ENSKMAP00000009757	ENSKMAP00000016263	Cleavage and polyadenylation specific factor 3.	LSM10, U7 small nuclear RNA associated.	0.797
CPSF3	cdc73	ENSKMAP00000009757	ENSKMAP00000006471	Cleavage and polyadenylation specific factor 3.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.410
CPSF3	lsm11	ENSKMAP00000009757	ENSKMAP00000012213	Cleavage and polyadenylation specific factor 3.	LSM11, U7 small nuclear RNA associated.	0.519
CPSF3	prkdc	ENSKMAP00000009757	ENSKMAP00000004514	Cleavage and polyadenylation specific factor 3.	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.	0.415
CTDSP1	ccnh	ENSKMAP00000003649	ENSKMAP00000006920	CTD small phosphatase 1.	Cyclin H; Belongs to the cyclin family.	0.459
CTDSP1	mnat1	ENSKMAP00000003649	ENSKMAP00000007944	CTD small phosphatase 1.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.449
Cdkn2c	ENSKMAP00000004056	ENSKMAP00000030146	ENSKMAP00000004056	Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).	Uncharacterized protein.	0.453
Cdkn2c	LOC108233174	ENSKMAP00000030146	ENSKMAP00000014487	Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).	Cyclin D2, b; Belongs to the cyclin family.	0.608
Cdkn2c	LOC108240964	ENSKMAP00000030146	ENSKMAP00000000463	Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).	Uncharacterized protein.	0.469
Cdkn2c	ccnd1	ENSKMAP00000030146	ENSKMAP00000017242	Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).	Cyclin D1; Belongs to the cyclin family.	0.608
Cdkn2c	ccnd2	ENSKMAP00000030146	ENSKMAP00000029094	Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).	Cyclin D2, a; Belongs to the cyclin family.	0.608
ENSKMAP00000004056	CDKN2A	ENSKMAP00000004056	ENSKMAP00000001588	Uncharacterized protein.	Cyclin dependent kinase inhibitor 2A.	0.500