STRINGSTRING
psmc6 psmc6 med14 med14 LOC108251031 LOC108251031 ENSKMAP00000009511 ENSKMAP00000009511 taf6 taf6 ENSKMAP00000011188 ENSKMAP00000011188 nkx2-5 nkx2-5 srf srf LOC108251136 LOC108251136 gtf2a2 gtf2a2 taf12 taf12 TAF4 TAF4 taf10 taf10 sub1 sub1 LOC108228382 LOC108228382 paxip1 paxip1 ercc1 ercc1 ercc6 ercc6 med1 med1 dhx36 dhx36 ENSKMAP00000023670 ENSKMAP00000023670 fosl1 fosl1 LOC108243306 LOC108243306 gtf2a1 gtf2a1 taf3 taf3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
med14Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1435 aa)
LOC108251031TAFH domain-containing protein. (933 aa)
ENSKMAP00000009511BZIP domain-containing protein. (107 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
ENSKMAP00000011188Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
nkx2-5NK2 homeobox 5. (302 aa)
srfSerum response factor b. (596 aa)
LOC108251136MADS-box domain-containing protein. (494 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (160 aa)
TAF4TATA-box binding protein associated factor 4. (894 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (188 aa)
sub1PC4 domain-containing protein. (125 aa)
LOC108228382JunE proto-oncogene, AP-1 transcription factor subunit. (332 aa)
paxip1PAX interacting (with transcription-activation domain) protein 1. (1049 aa)
ercc1Excision repair cross-complementation group 1. (352 aa)
ercc6Excision repair cross-complementation group 6. (1442 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1105 aa)
ENSKMAP00000023670TAF4 domain-containing protein. (300 aa)
fosl1FOS-like antigen 1a. (331 aa)
LOC108243306TAFH domain-containing protein. (1037 aa)
gtf2a1General transcription factor IIA, 1. (385 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (982 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (34%) [HD]