25 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	med14	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1435 aa)
	LOC108251031	TAFH domain-containing protein. (933 aa)
	ENSKMAP00000009511	BZIP domain-containing protein. (107 aa)
	taf6	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
	ENSKMAP00000011188	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
	nkx2-5	NK2 homeobox 5. (302 aa)
	srf	Serum response factor b. (596 aa)
	LOC108251136	MADS-box domain-containing protein. (494 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (160 aa)
	TAF4	TATA-box binding protein associated factor 4. (894 aa)
	taf10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (188 aa)
	sub1	PC4 domain-containing protein. (125 aa)
	LOC108228382	JunE proto-oncogene, AP-1 transcription factor subunit. (332 aa)
	paxip1	PAX interacting (with transcription-activation domain) protein 1. (1049 aa)
	ercc1	Excision repair cross-complementation group 1. (352 aa)
	ercc6	Excision repair cross-complementation group 6. (1442 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1105 aa)
	ENSKMAP00000023670	TAF4 domain-containing protein. (300 aa)
	fosl1	FOS-like antigen 1a. (331 aa)
	LOC108243306	TAFH domain-containing protein. (1037 aa)
	gtf2a1	General transcription factor IIA, 1. (385 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (982 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000009511	ENSKMAP00000011188	ENSKMAP00000009511	ENSKMAP00000011188	BZIP domain-containing protein.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.759
ENSKMAP00000009511	LOC108228382	ENSKMAP00000009511	ENSKMAP00000020178	BZIP domain-containing protein.	JunE proto-oncogene, AP-1 transcription factor subunit.	0.759
ENSKMAP00000011188	ENSKMAP00000009511	ENSKMAP00000011188	ENSKMAP00000009511	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	BZIP domain-containing protein.	0.759
ENSKMAP00000011188	fosl1	ENSKMAP00000011188	ENSKMAP00000004303	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	FOS-like antigen 1a.	0.759
ENSKMAP00000011188	taf12	ENSKMAP00000011188	ENSKMAP00000017110	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.508
ENSKMAP00000023670	gtf2a1	ENSKMAP00000023670	ENSKMAP00000004680	TAF4 domain-containing protein.	General transcription factor IIA, 1.	0.752
ENSKMAP00000023670	gtf2a2	ENSKMAP00000023670	ENSKMAP00000014646	TAF4 domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.840
ENSKMAP00000023670	taf10	ENSKMAP00000023670	ENSKMAP00000017294	TAF4 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.930
ENSKMAP00000023670	taf12	ENSKMAP00000023670	ENSKMAP00000017110	TAF4 domain-containing protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
ENSKMAP00000023670	taf3	ENSKMAP00000023670	ENSKMAP00000005369	TAF4 domain-containing protein.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.879
ENSKMAP00000023670	taf6	ENSKMAP00000023670	ENSKMAP00000010981	TAF4 domain-containing protein.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
LOC108228382	ENSKMAP00000009511	ENSKMAP00000020178	ENSKMAP00000009511	JunE proto-oncogene, AP-1 transcription factor subunit.	BZIP domain-containing protein.	0.759
LOC108228382	fosl1	ENSKMAP00000020178	ENSKMAP00000004303	JunE proto-oncogene, AP-1 transcription factor subunit.	FOS-like antigen 1a.	0.759
LOC108228382	taf12	ENSKMAP00000020178	ENSKMAP00000017110	JunE proto-oncogene, AP-1 transcription factor subunit.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.508
LOC108243306	gtf2a1	ENSKMAP00000001839	ENSKMAP00000004680	TAFH domain-containing protein.	General transcription factor IIA, 1.	0.752
LOC108243306	gtf2a2	ENSKMAP00000001839	ENSKMAP00000014646	TAFH domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.840
LOC108243306	taf10	ENSKMAP00000001839	ENSKMAP00000017294	TAFH domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.930
LOC108243306	taf12	ENSKMAP00000001839	ENSKMAP00000017110	TAFH domain-containing protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
LOC108243306	taf3	ENSKMAP00000001839	ENSKMAP00000005369	TAFH domain-containing protein.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.879
LOC108243306	taf6	ENSKMAP00000001839	ENSKMAP00000010981	TAFH domain-containing protein.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953