60 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ing4	Inhibitor of growth protein. (247 aa)
	chek1	Checkpoint kinase 1; Belongs to the protein kinase superfamily. (455 aa)
	LOC108233514	Gremlin 1a, DAN family BMP antagonist. (173 aa)
	pnkp	Polynucleotide kinase 3'-phosphatase. (590 aa)
	gnl3l	Guanine nucleotide binding protein-like 3 (nucleolar)-like. (563 aa)
	parp3	Poly [ADP-ribose] polymerase. (530 aa)
	jade2	Jade family PHD finger 2. (912 aa)
	ccdc174	Coiled-coil domain containing 174. (535 aa)
	terf2	HTH myb-type domain-containing protein. (603 aa)
	parp4	Poly [ADP-ribose] polymerase. (1049 aa)
	ENSKMAP00000024705	Uncharacterized protein. (516 aa)
	Nek2	NIMA-related kinase 2. (492 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1590 aa)
	gfer	Sulfhydryl oxidase. (195 aa)
	LOC108236096	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (506 aa)
	ENSKMAP00000021613	Decapping mRNA 2. (319 aa)
	LOC108247157	Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (621 aa)
	exosc10	Exosome component 10. (886 aa)
	cct5	Chaperonin containing TCP1, subunit 5 (epsilon). (541 aa)
	nvl	Nuclear VCP like. (821 aa)
	ENSKMAP00000018943	Uncharacterized protein. (84 aa)
	fbxo4	F-box protein 4. (395 aa)
	pinx1	PIN2 (TERF1) interacting telomerase inhibitor 1. (364 aa)
	LOC108245905	TERF1 (TRF1)-interacting nuclear factor 2. (570 aa)
	xrcc5	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (725 aa)
	rfc4	Replication factor C (activator 1) 4. (388 aa)
	ten1	TEN1 subunit of CST complex. (135 aa)
	polg2	Polymerase (DNA directed), gamma 2, accessory subunit. (448 aa)
	LOC108232032	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (569 aa)
	ENSKMAP00000013709	Uncharacterized protein. (437 aa)
	gins2	DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (207 aa)
	rfc2	Replication factor C (activator 1) 2. (357 aa)
	dkc1	Dyskeratosis congenita 1, dyskerin. (497 aa)
	nox4	FAD-binding FR-type domain-containing protein. (622 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (536 aa)
	chtf18	CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae). (775 aa)
	terf1	Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (366 aa)
	pot1	Protection of telomeres 1 homolog. (770 aa)
	men1	Multiple endocrine neoplasia I. (628 aa)
	gins3	GINS complex subunit 3. (211 aa)
	rfc3	Replication factor C (activator 1) 3. (356 aa)
	naf1	Uncharacterized protein. (486 aa)
	wrap53	WD repeat containing, antisense to TP53. (547 aa)
	rgcc	Regulator of cell cycle. (175 aa)
	gins4	DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (223 aa)
	ing5	Inhibitor of growth protein. (231 aa)
	chtf8	CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (136 aa)
	rfc5	Replication factor C (activator 1) 5. (339 aa)
	cct3	T-complex protein 1 subunit gamma. (540 aa)
	nat10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1037 aa)
	LOC108241600	Homeobox containing 1a. (347 aa)
	bmpr2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1061 aa)
	mapkapk5	MAPK activated protein kinase 5. (471 aa)
	ENSKMAP00000001053	Uncharacterized protein. (109 aa)
	GREM1	Gremlin; Belongs to the DAN family. (172 aa)
	Atm	Uncharacterized protein. (130 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (439 aa)
	ENSKMAP00000000467	TAN domain-containing protein. (123 aa)
	ENSKMAP00000000220	Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (525 aa)
	ENSKMAP00000000213	Cytochrome P450, family 1, subfamily C, polypeptide 2; Belongs to the cytochrome P450 family. (524 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atm	ENSKMAP00000000467	ENSKMAP00000000507	ENSKMAP00000000467	Uncharacterized protein.	TAN domain-containing protein.	0.926
Atm	ENSKMAP00000001053	ENSKMAP00000000507	ENSKMAP00000001053	Uncharacterized protein.	Uncharacterized protein.	0.996
Atm	chek1	ENSKMAP00000000507	ENSKMAP00000030103	Uncharacterized protein.	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	0.978
Atm	rfc2	ENSKMAP00000000507	ENSKMAP00000011442	Uncharacterized protein.	Replication factor C (activator 1) 2.	0.753
Atm	rfc3	ENSKMAP00000000507	ENSKMAP00000007640	Uncharacterized protein.	Replication factor C (activator 1) 3.	0.739
Atm	rfc4	ENSKMAP00000000507	ENSKMAP00000015449	Uncharacterized protein.	Replication factor C (activator 1) 4.	0.758
Atm	rfc5	ENSKMAP00000000507	ENSKMAP00000002111	Uncharacterized protein.	Replication factor C (activator 1) 5.	0.737
Atm	terf1	ENSKMAP00000000507	ENSKMAP00000009379	Uncharacterized protein.	Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.	0.535
Atm	xrcc5	ENSKMAP00000000507	ENSKMAP00000015947	Uncharacterized protein.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.891
ENSKMAP00000000467	Atm	ENSKMAP00000000467	ENSKMAP00000000507	TAN domain-containing protein.	Uncharacterized protein.	0.926
ENSKMAP00000000467	ENSKMAP00000001053	ENSKMAP00000000467	ENSKMAP00000001053	TAN domain-containing protein.	Uncharacterized protein.	0.970
ENSKMAP00000000467	chek1	ENSKMAP00000000467	ENSKMAP00000030103	TAN domain-containing protein.	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	0.786
ENSKMAP00000000467	rfc2	ENSKMAP00000000467	ENSKMAP00000011442	TAN domain-containing protein.	Replication factor C (activator 1) 2.	0.753
ENSKMAP00000000467	rfc3	ENSKMAP00000000467	ENSKMAP00000007640	TAN domain-containing protein.	Replication factor C (activator 1) 3.	0.739
ENSKMAP00000000467	rfc4	ENSKMAP00000000467	ENSKMAP00000015449	TAN domain-containing protein.	Replication factor C (activator 1) 4.	0.758
ENSKMAP00000000467	rfc5	ENSKMAP00000000467	ENSKMAP00000002111	TAN domain-containing protein.	Replication factor C (activator 1) 5.	0.737
ENSKMAP00000000467	terf1	ENSKMAP00000000467	ENSKMAP00000009379	TAN domain-containing protein.	Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.	0.535
ENSKMAP00000000467	xrcc5	ENSKMAP00000000467	ENSKMAP00000015947	TAN domain-containing protein.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.891
ENSKMAP00000001053	Atm	ENSKMAP00000001053	ENSKMAP00000000507	Uncharacterized protein.	Uncharacterized protein.	0.996
ENSKMAP00000001053	ENSKMAP00000000467	ENSKMAP00000001053	ENSKMAP00000000467	Uncharacterized protein.	TAN domain-containing protein.	0.970