STRINGSTRING
LOC108228916 LOC108228916 rb1 rb1 ep300 ep300 gtf2b gtf2b LOC108250440 LOC108250440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
rb1Retinoblastoma 1. (915 aa)
ep300E1A binding protein p300 b. (2785 aa)
gtf2bGeneral transcription factor IIB. (224 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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