14 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cpsf6	Cleavage and polyadenylation specific factor 6. (582 aa)
	cstf2	Cleavage stimulation factor, 3' pre-RNA, subunit 2. (491 aa)
	ENSKMAP00000001637	WD repeat domain 33. (267 aa)
	cpsf1	Cleavage and polyadenylation specific factor 1. (1227 aa)
	LOC108249674	Cleavage and polyadenylation specific factor 3. (686 aa)
	CPSF7	Cleavage and polyadenylation specific factor 7. (471 aa)
	LOC108233151	Transmembrane protein 240a. (175 aa)
	CPSF3	Cleavage and polyadenylation specific factor 3. (690 aa)
	ENSKMAP00000021047	Cleavage and polyadenylation specific factor 4. (265 aa)
	sympk	Symplekin. (1221 aa)
	cpsf2	Cleavage and polyadenylation specificity factor subunit 2. (787 aa)
	ENSKMAP00000029148	Uncharacterized protein. (227 aa)
	ssu72	SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
	LOC108241575	FIP1 like 1b (S. cerevisiae). (541 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF3	CPSF7	ENSKMAP00000009757	ENSKMAP00000004259	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 7.	0.664
CPSF3	ENSKMAP00000001637	ENSKMAP00000009757	ENSKMAP00000001637	Cleavage and polyadenylation specific factor 3.	WD repeat domain 33.	0.992
CPSF3	ENSKMAP00000021047	ENSKMAP00000009757	ENSKMAP00000021047	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 4.	0.976
CPSF3	ENSKMAP00000029148	ENSKMAP00000009757	ENSKMAP00000029148	Cleavage and polyadenylation specific factor 3.	Uncharacterized protein.	0.813
CPSF3	LOC108233151	ENSKMAP00000009757	ENSKMAP00000006429	Cleavage and polyadenylation specific factor 3.	Transmembrane protein 240a.	0.813
CPSF3	LOC108241575	ENSKMAP00000009757	ENSKMAP00000029628	Cleavage and polyadenylation specific factor 3.	FIP1 like 1b (S. cerevisiae).	0.992
CPSF3	LOC108249674	ENSKMAP00000009757	ENSKMAP00000003680	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 3.	0.900
CPSF3	cpsf1	ENSKMAP00000009757	ENSKMAP00000002664	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 1.	0.979
CPSF3	cpsf2	ENSKMAP00000009757	ENSKMAP00000026238	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specificity factor subunit 2.	0.996
CPSF3	cpsf6	ENSKMAP00000009757	ENSKMAP00000019893	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 6.	0.664
CPSF3	cstf2	ENSKMAP00000009757	ENSKMAP00000001334	Cleavage and polyadenylation specific factor 3.	Cleavage stimulation factor, 3' pre-RNA, subunit 2.	0.966
CPSF3	ssu72	ENSKMAP00000009757	ENSKMAP00000029154	Cleavage and polyadenylation specific factor 3.	SSU72 homolog, RNA polymerase II CTD phosphatase.	0.932
CPSF3	sympk	ENSKMAP00000009757	ENSKMAP00000021932	Cleavage and polyadenylation specific factor 3.	Symplekin.	0.978
CPSF7	CPSF3	ENSKMAP00000004259	ENSKMAP00000009757	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specific factor 3.	0.664
CPSF7	ENSKMAP00000001637	ENSKMAP00000004259	ENSKMAP00000001637	Cleavage and polyadenylation specific factor 7.	WD repeat domain 33.	0.732
CPSF7	ENSKMAP00000021047	ENSKMAP00000004259	ENSKMAP00000021047	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specific factor 4.	0.739
CPSF7	LOC108241575	ENSKMAP00000004259	ENSKMAP00000029628	Cleavage and polyadenylation specific factor 7.	FIP1 like 1b (S. cerevisiae).	0.712
CPSF7	LOC108249674	ENSKMAP00000004259	ENSKMAP00000003680	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specific factor 3.	0.664
CPSF7	cpsf1	ENSKMAP00000004259	ENSKMAP00000002664	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specific factor 1.	0.758
CPSF7	cpsf2	ENSKMAP00000004259	ENSKMAP00000026238	Cleavage and polyadenylation specific factor 7.	Cleavage and polyadenylation specificity factor subunit 2.	0.843