24 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	imp4	IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
	fbxw9	F-box and WD repeat domain containing 9. (580 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
	mphosph10	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (682 aa)
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (747 aa)
	imp3	IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
	LOC108231778	Si:ch211-197l9.5. (315 aa)
	cmss1	Cms1 ribosomal small subunit homolog. (233 aa)
	LOC108250319	PWP2 small subunit processome component. (909 aa)
	hunk	Hormonally up-regulated Neu-associated kinase. (657 aa)
	nol6	Nucleolar protein 6. (1150 aa)
	utp20	UTP20 small subunit processome component. (2613 aa)
	noc4l	Nucleolar complex associated 4 homolog. (525 aa)
	nsa2	NSA2 ribosome biogenesis homolog (S. cerevisiae). (260 aa)
	rrp7a	Ribosomal RNA processing 7 homolog A. (304 aa)
	utp18	WD_REPEATS_REGION domain-containing protein. (533 aa)
	LOC108231920	Si:ch73-142c19.1. (469 aa)
	nop14	NOP14 nucleolar protein homolog (yeast). (868 aa)
	pes1	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (581 aa)
	wdr36	WD repeat domain 36. (670 aa)
	wdr3	WD repeat domain 3. (931 aa)
	noc2l	NOC2-like nucleolar associated transcriptional repressor. (748 aa)
	utp6	UTP6 small subunit processome component. (595 aa)
	rsl24d1	Ribosomal L24 domain containing 1. (164 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108250319	bop1	ENSKMAP00000004184	ENSKMAP00000002282	PWP2 small subunit processome component.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.869
LOC108250319	imp3	ENSKMAP00000004184	ENSKMAP00000002555	PWP2 small subunit processome component.	IMP U3 small nucleolar ribonucleoprotein 3.	0.997
LOC108250319	imp4	ENSKMAP00000004184	ENSKMAP00000013988	PWP2 small subunit processome component.	IMP U3 small nucleolar ribonucleoprotein 4.	0.997
LOC108250319	mphosph10	ENSKMAP00000004184	ENSKMAP00000002180	PWP2 small subunit processome component.	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.	0.998
LOC108250319	noc2l	ENSKMAP00000004184	ENSKMAP00000022302	PWP2 small subunit processome component.	NOC2-like nucleolar associated transcriptional repressor.	0.929
LOC108250319	noc4l	ENSKMAP00000004184	ENSKMAP00000017146	PWP2 small subunit processome component.	Nucleolar complex associated 4 homolog.	0.998
LOC108250319	nol6	ENSKMAP00000004184	ENSKMAP00000006346	PWP2 small subunit processome component.	Nucleolar protein 6.	0.999
LOC108250319	nop14	ENSKMAP00000004184	ENSKMAP00000020420	PWP2 small subunit processome component.	NOP14 nucleolar protein homolog (yeast).	0.999
LOC108250319	nsa2	ENSKMAP00000004184	ENSKMAP00000017776	PWP2 small subunit processome component.	NSA2 ribosome biogenesis homolog (S. cerevisiae).	0.408
LOC108250319	pes1	ENSKMAP00000004184	ENSKMAP00000020603	PWP2 small subunit processome component.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.930
LOC108250319	rrp7a	ENSKMAP00000004184	ENSKMAP00000018599	PWP2 small subunit processome component.	Ribosomal RNA processing 7 homolog A.	0.998
LOC108250319	rsl24d1	ENSKMAP00000004184	ENSKMAP00000029391	PWP2 small subunit processome component.	Ribosomal L24 domain containing 1.	0.710
LOC108250319	utp18	ENSKMAP00000004184	ENSKMAP00000018640	PWP2 small subunit processome component.	WD_REPEATS_REGION domain-containing protein.	0.999
LOC108250319	utp20	ENSKMAP00000004184	ENSKMAP00000008092	PWP2 small subunit processome component.	UTP20 small subunit processome component.	0.999
LOC108250319	utp6	ENSKMAP00000004184	ENSKMAP00000029179	PWP2 small subunit processome component.	UTP6 small subunit processome component.	0.999
LOC108250319	wdr12	ENSKMAP00000004184	ENSKMAP00000001123	PWP2 small subunit processome component.	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.953
LOC108250319	wdr3	ENSKMAP00000004184	ENSKMAP00000021580	PWP2 small subunit processome component.	WD repeat domain 3.	0.999
LOC108250319	wdr36	ENSKMAP00000004184	ENSKMAP00000020644	PWP2 small subunit processome component.	WD repeat domain 36.	0.999
bop1	LOC108250319	ENSKMAP00000002282	ENSKMAP00000004184	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	PWP2 small subunit processome component.	0.869
bop1	imp3	ENSKMAP00000002282	ENSKMAP00000002555	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	IMP U3 small nucleolar ribonucleoprotein 3.	0.487