65 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hif1an	Hypoxia inducible factor 1 subunit alpha inhibitor. (354 aa)
	bspry	B30.2/SPRY domain-containing protein. (329 aa)
	LOC108231593	Si:ch211-286o17.1. (330 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (383 aa)
	LOC108236615	Nanos homolog 1; Belongs to the nanos family. (232 aa)
	LOC108243413	Oxysterol-binding protein; Belongs to the OSBP family. (975 aa)
	cib1	Calcium and integrin binding 1 (calmyrin). (189 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (1967 aa)
	LOC108237634	Tyrosine-protein kinase. (549 aa)
	wbp2	WW domain binding protein 2. (262 aa)
	LOC108234142	Uncharacterized protein. (541 aa)
	LOC108248515	Oxysterol-binding protein; Belongs to the OSBP family. (772 aa)
	anp32a	Acidic (leucine-rich) nuclear phosphoprotein 32 family, member A. (254 aa)
	LOC108240605	Metadherin a. (491 aa)
	rundc1	RUN domain containing 1. (565 aa)
	gak	Cyclin G associated kinase. (1315 aa)
	LOC108239949	Membrane associated guanylate kinase, WW and PDZ domain containing 2b. (1340 aa)
	tmem134	Transmembrane protein 134. (211 aa)
	LOC108231916	Oxysterol-binding protein; Belongs to the OSBP family. (765 aa)
	LOC108237662	Uncharacterized protein. (297 aa)
	ofcc1	Uncharacterized protein. (999 aa)
	osbpl7	Oxysterol-binding protein; Belongs to the OSBP family. (862 aa)
	LOC108232846	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	dhx58	DEXH (Asp-Glu-X-His) box polypeptide 58. (681 aa)
	hmgcll1	3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1. (336 aa)
	LOC108237365	Protein kinase domain-containing protein. (523 aa)
	LOC108230380	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (183 aa)
	LOC108244897	Si:dkey-43k4.5; Belongs to the potassium channel family. (502 aa)
	LOC108241911	Oxysterol-binding protein; Belongs to the OSBP family. (830 aa)
	prkaca	Uncharacterized protein; Belongs to the protein kinase superfamily. (351 aa)
	LOC108243703	Arylalkylamine N-acetyltransferase 2. (249 aa)
	LOC108234567	Si:ch211-106a19.1. (753 aa)
	LOC108231982	Forkhead box P3b. (323 aa)
	nrbp1	Nuclear receptor binding protein 1. (546 aa)
	LOC108237298	Cryptochrome circadian regulator 5. (546 aa)
	pclaf	PCNA clamp associated factor. (116 aa)
	LOC108239664	Uncharacterized protein; Belongs to the protein kinase superfamily. (349 aa)
	ENSKMAP00000020954	Lymphocyte antigen 6 family member pge. (133 aa)
	myc	Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (387 aa)
	osbpl6	Oxysterol-binding protein; Belongs to the OSBP family. (810 aa)
	LOC108245362	Oxysterol-binding protein; Belongs to the OSBP family. (949 aa)
	rangap1	RAN GTPase activating protein 1a. (553 aa)
	SRC	Tyrosine-protein kinase. (550 aa)
	LOC108242023	Oxysterol-binding protein; Belongs to the OSBP family. (841 aa)
	creb3l2	cAMP responsive element binding protein 3-like 2. (550 aa)
	wbp2nl	WBP2 N-terminal like. (288 aa)
	LOC108248268	Monoacylglycerol O-acyltransferase 3b. (326 aa)
	OSBPL1A	Oxysterol-binding protein; Belongs to the OSBP family. (991 aa)
	fbxl5	F-box and leucine-rich repeat protein 5. (687 aa)
	atraid	All-trans retinoic acid-induced differentiation factor. (239 aa)
	LOC108241350	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (351 aa)
	LOC108236158	N-acetyltransferase domain-containing protein. (226 aa)
	dnajc6	DnaJ (Hsp40) homolog, subfamily C, member 6. (898 aa)
	AANAT	Arylalkylamine N-acetyltransferase 1. (201 aa)
	epcam	Epithelial cell adhesion molecule. (277 aa)
	magi2	Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (1427 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (287 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	dcun1d3	DCN1-like protein. (326 aa)
	mogat2	Monoacylglycerol O-acyltransferase 2. (338 aa)
	wdr44	WD repeat domain 44. (908 aa)
	akap12	A kinase (PRKA) anchor protein 12b. (1433 aa)
	LOC108232721	Oxysterol-binding protein; Belongs to the OSBP family. (749 aa)
	nrde2	NRDE-2, necessary for RNA interference, domain containing. (1200 aa)
	LOC108228928	Monoacylglycerol O-acyltransferase 3a. (335 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AANAT	LOC108236158	ENSKMAP00000015630	ENSKMAP00000017445	Arylalkylamine N-acetyltransferase 1.	N-acetyltransferase domain-containing protein.	0.901
AANAT	LOC108243703	ENSKMAP00000015630	ENSKMAP00000025048	Arylalkylamine N-acetyltransferase 1.	Arylalkylamine N-acetyltransferase 2.	0.901
LOC108228928	LOC108248268	ENSKMAP00000011387	ENSKMAP00000018412	Monoacylglycerol O-acyltransferase 3a.	Monoacylglycerol O-acyltransferase 3b.	0.903
LOC108228928	mogat2	ENSKMAP00000011387	ENSKMAP00000014100	Monoacylglycerol O-acyltransferase 3a.	Monoacylglycerol O-acyltransferase 2.	0.901
LOC108231593	LOC108237662	ENSKMAP00000022811	ENSKMAP00000006566	Si:ch211-286o17.1.	Uncharacterized protein.	0.900
LOC108231593	myc	ENSKMAP00000022811	ENSKMAP00000021333	Si:ch211-286o17.1.	Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.	0.403
LOC108236158	AANAT	ENSKMAP00000017445	ENSKMAP00000015630	N-acetyltransferase domain-containing protein.	Arylalkylamine N-acetyltransferase 1.	0.901
LOC108236158	LOC108243703	ENSKMAP00000017445	ENSKMAP00000025048	N-acetyltransferase domain-containing protein.	Arylalkylamine N-acetyltransferase 2.	0.902
LOC108237634	SRC	ENSKMAP00000002899	ENSKMAP00000019871	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.901
LOC108237662	LOC108231593	ENSKMAP00000006566	ENSKMAP00000022811	Uncharacterized protein.	Si:ch211-286o17.1.	0.900
LOC108239664	LOC108241350	ENSKMAP00000020712	ENSKMAP00000017710	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC108239664	creb3l2	ENSKMAP00000020712	ENSKMAP00000018803	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP responsive element binding protein 3-like 2.	0.650
LOC108239664	prkaca	ENSKMAP00000020712	ENSKMAP00000025122	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108239664	prkacb	ENSKMAP00000020712	ENSKMAP00000014230	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108241350	LOC108239664	ENSKMAP00000017710	ENSKMAP00000020712	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108241350	creb3l2	ENSKMAP00000017710	ENSKMAP00000018803	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	cAMP responsive element binding protein 3-like 2.	0.650
LOC108241350	prkaca	ENSKMAP00000017710	ENSKMAP00000025122	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108241350	prkacb	ENSKMAP00000017710	ENSKMAP00000014230	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC108243703	AANAT	ENSKMAP00000025048	ENSKMAP00000015630	Arylalkylamine N-acetyltransferase 2.	Arylalkylamine N-acetyltransferase 1.	0.901
LOC108243703	LOC108236158	ENSKMAP00000025048	ENSKMAP00000017445	Arylalkylamine N-acetyltransferase 2.	N-acetyltransferase domain-containing protein.	0.902