STRINGSTRING
psmc1 psmc1 psmc6 psmc6 mcm9 mcm9 nars2 nars2 ccar1 ccar1 ttc14 ttc14 rpl8 rpl8 mcm4 mcm4 mcm8 mcm8 radx radx dhx8 dhx8 rpa1 rpa1 CSDE1 CSDE1 LOC108249201 LOC108249201 pot1 pot1 mrps17 mrps17 kars1 kars1 ENSKMAP00000009313 ENSKMAP00000009313 nars1 nars1 LOC108248126 LOC108248126 LOC108249826 LOC108249826 dis3l2 dis3l2 brca2 brca2 psmc4 psmc4 ENSKMAP00000010500 ENSKMAP00000010500 mrps12 mrps12 polr2h polr2h mcm6 mcm6 mcm10 mcm10 spout1 spout1 dars2 dars2 mrpl2 mrpl2 polr2g polr2g ten1 ten1 LOC108250621 LOC108250621 psmc2 psmc2 mcm5 mcm5 ybx1 ybx1 lig3 lig3 rpa2 rpa2 LOC108235539 LOC108235539 ssbp1 ssbp1 mcm2 mcm2 eif1ad eif1ad dis3l dis3l CSDC2 CSDC2 polr3h polr3h rpa3 rpa3 dars1 dars1 rps28 rps28 Lin28b Lin28b lig1 lig1 exosc2 exosc2 PNPT1 PNPT1 LOC108249553 LOC108249553 helz2 helz2 ENSKMAP00000024225 ENSKMAP00000024225 nabp1 nabp1 exosc3 exosc3 rps23 rps23 RPS11 RPS11 ddias ddias eif2s1 eif2s1 mcm7 mcm7 carhsp1 carhsp1 rmi2 rmi2 supt6h supt6h mcm3 mcm3 rngtt rngtt psmc3 psmc3 psmc5 psmc5 ENSKMAP00000028580 ENSKMAP00000028580 stn1 stn1 yars1 yars1 LOC108235856 LOC108235856 YBX2 YBX2 srbd1 srbd1 aimp1 aimp1 exosc1 exosc1 lig4 lig4 LOC108246749 LOC108246749 dis3 dis3 RPA1 RPA1 zcchc17 zcchc17
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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psmc1Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
mcm9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1140 aa)
nars2Asparaginyl-tRNA synthetase 2, mitochondrial. (481 aa)
ccar1Cell division cycle and apoptosis regulator 1. (1236 aa)
ttc14Tetratricopeptide repeat domain 14. (713 aa)
rpl8Ribosomal protein L8. (267 aa)
mcm4DNA helicase; Belongs to the MCM family. (861 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (781 aa)
radxRPA1 related single stranded DNA binding protein. (771 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1225 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
CSDE1Cold shock domain containing E1, RNA-binding. (861 aa)
LOC108249201Eukaryotic translation initiation factor 5A. (153 aa)
pot1Protection of telomeres 1 homolog. (770 aa)
mrps17Mitochondrial ribosomal protein S17. (146 aa)
kars1Lysine--tRNA ligase. (610 aa)
ENSKMAP00000009313Methionine sulfoxide reductase B1b. (467 aa)
nars1Asparaginyl-tRNA synthetase. (559 aa)
LOC108248126RPA_C domain-containing protein. (199 aa)
LOC108249826Aminoacyl tRNA synthetase complex interacting multifunctional protein 1b. (293 aa)
dis3l2DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. (965 aa)
brca2BRCA2 DNA repair associated. (2641 aa)
psmc4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
ENSKMAP00000010500Uncharacterized protein. (850 aa)
mrps12Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (158 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
mcm6DNA helicase; Belongs to the MCM family. (823 aa)
mcm10Minichromosome maintenance 10 replication initiation factor. (848 aa)
spout1SPOUT domain containing methyltransferase 1. (377 aa)
dars2Aspartyl-tRNA synthetase 2, mitochondrial. (645 aa)
mrpl2Mitochondrial ribosomal protein L2. (297 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (189 aa)
ten1TEN1 subunit of CST complex. (135 aa)
LOC108250621Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (170 aa)
psmc2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
mcm5DNA helicase; Belongs to the MCM family. (737 aa)
ybx1Y box binding protein 1. (303 aa)
lig3DNA ligase. (1011 aa)
rpa2RPA_C domain-containing protein. (274 aa)
LOC108235539Lin-28 homolog A. (202 aa)
ssbp1Single-stranded DNA binding protein 1. (146 aa)
mcm2DNA helicase; Belongs to the MCM family. (890 aa)
eif1adEukaryotic translation initiation factor 1A domain containing. (183 aa)
dis3lDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1041 aa)
CSDC2Cold shock domain containing C2. (155 aa)
polr3hPolymerase (RNA) III (DNA directed) polypeptide H. (214 aa)
rpa3Replication protein A 14kDa subunit. (122 aa)
dars1Aspartyl-tRNA synthetase. (531 aa)
rps28Ribosomal protein S28. (69 aa)
Lin28bLin-28 homolog B (C. elegans). (239 aa)
lig1DNA ligase. (1010 aa)
exosc2Exosome component 2. (290 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (770 aa)
LOC108249553Eukaryotic translation initiation factor 5A. (156 aa)
helz2Uncharacterized protein. (2894 aa)
ENSKMAP00000024225Si:dkey-159f12.2. (169 aa)
nabp1Nucleic acid binding protein 1a. (219 aa)
exosc3Exosome component 3. (244 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
RPS11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (205 aa)
ddiasRep_fac-A_C domain-containing protein. (744 aa)
eif2s1Eukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (727 aa)
carhsp1Calcium regulated heat stable protein 1. (157 aa)
rmi2RecQ mediated genome instability 2. (145 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1751 aa)
mcm3DNA helicase; Belongs to the MCM family. (815 aa)
rngttPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (601 aa)
psmc3Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
ENSKMAP00000028580Programmed cell death 11. (901 aa)
stn1STN1 subunit of CST complex. (315 aa)
yars1Tyrosine--tRNA ligase. (532 aa)
LOC108235856Cold shock domain containing C2, RNA binding a. (157 aa)
YBX2Y-box binding protein 2. (211 aa)
srbd1S1 RNA binding domain 1. (1005 aa)
aimp1Aminoacyl tRNA synthetase complex interacting multifunctional protein 1a. (320 aa)
exosc1Exosome component 1. (237 aa)
lig4DNA ligase. (922 aa)
LOC108246749Uncharacterized protein. (2074 aa)
dis3DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (945 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
zcchc17Zinc finger, CCHC domain containing 17. (245 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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