27 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tada2b	Transcriptional adapter. (420 aa)
	ncor2	Nuclear receptor corepressor 2. (1795 aa)
	tada2a	Transcriptional adapter. (445 aa)
	smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1049 aa)
	LOC108233471	ELM2 and Myb/SANT-like domain containing 1a. (1063 aa)
	rere	Arginine-glutamic acid dipeptide (RE) repeats a. (1545 aa)
	dnajc1	DnaJ (Hsp40) homolog, subfamily C, member 1. (514 aa)
	mier3	Mesoderm induction early response 1, family member 3 b. (553 aa)
	mta1	Metastasis associated 1. (619 aa)
	elmsan1	ELM2 and Myb/SANT-like domain containing 1b. (1064 aa)
	ncor1	Nuclear receptor corepressor 1. (2321 aa)
	Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2. (272 aa)
	mta3	Metastasis associated 1 family, member 3. (700 aa)
	cramp1	Cramped chromatin regulator homolog 1. (1177 aa)
	LOC108231352	Arginine-glutamic acid dipeptide (RE) repeats b. (1088 aa)
	RCOR1	REST corepressor 1. (392 aa)
	rcor2	REST corepressor 2. (549 aa)
	mta2	Metastasis associated 1 family, member 2. (665 aa)
	mier1	Mesoderm induction early response 1b, transcriptional regulator. (502 aa)
	LOC108246840	Uncharacterized protein. (739 aa)
	LOC108234834	Uncharacterized protein. (1019 aa)
	smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1035 aa)
	mysm1	Myb-like, SWIRM and MPN domains 1. (791 aa)
	LOC108237815	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (944 aa)
	smarcc1	Uncharacterized protein. (1144 aa)
	LOC108230564	Mesoderm induction early response 1, family member 2. (455 aa)
	rcor3	REST corepressor 3. (561 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dnajc2	dnajc1	ENSKMAP00000016167	ENSKMAP00000021717	DnaJ (Hsp40) homolog, subfamily C, member 2.	DnaJ (Hsp40) homolog, subfamily C, member 1.	0.408
Dnajc2	tada2a	ENSKMAP00000016167	ENSKMAP00000026333	DnaJ (Hsp40) homolog, subfamily C, member 2.	Transcriptional adapter.	0.487
Dnajc2	tada2b	ENSKMAP00000016167	ENSKMAP00000004630	DnaJ (Hsp40) homolog, subfamily C, member 2.	Transcriptional adapter.	0.487
LOC108233471	LOC108246840	ENSKMAP00000023541	ENSKMAP00000005631	ELM2 and Myb/SANT-like domain containing 1a.	Uncharacterized protein.	0.500
LOC108237815	smarca5	ENSKMAP00000002753	ENSKMAP00000005047	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.603
LOC108237815	smarcc2	ENSKMAP00000002753	ENSKMAP00000025429	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.	0.425
LOC108246840	LOC108233471	ENSKMAP00000005631	ENSKMAP00000023541	Uncharacterized protein.	ELM2 and Myb/SANT-like domain containing 1a.	0.500
LOC108246840	elmsan1	ENSKMAP00000005631	ENSKMAP00000017399	Uncharacterized protein.	ELM2 and Myb/SANT-like domain containing 1b.	0.500
RCOR1	mta1	ENSKMAP00000010512	ENSKMAP00000017565	REST corepressor 1.	Metastasis associated 1.	0.432
RCOR1	mta2	ENSKMAP00000010512	ENSKMAP00000008038	REST corepressor 1.	Metastasis associated 1 family, member 2.	0.432
RCOR1	mta3	ENSKMAP00000010512	ENSKMAP00000015500	REST corepressor 1.	Metastasis associated 1 family, member 3.	0.432
RCOR1	smarca5	ENSKMAP00000010512	ENSKMAP00000005047	REST corepressor 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.452
dnajc1	Dnajc2	ENSKMAP00000021717	ENSKMAP00000016167	DnaJ (Hsp40) homolog, subfamily C, member 1.	DnaJ (Hsp40) homolog, subfamily C, member 2.	0.408
dnajc1	tada2a	ENSKMAP00000021717	ENSKMAP00000026333	DnaJ (Hsp40) homolog, subfamily C, member 1.	Transcriptional adapter.	0.487
dnajc1	tada2b	ENSKMAP00000021717	ENSKMAP00000004630	DnaJ (Hsp40) homolog, subfamily C, member 1.	Transcriptional adapter.	0.487
elmsan1	LOC108246840	ENSKMAP00000017399	ENSKMAP00000005631	ELM2 and Myb/SANT-like domain containing 1b.	Uncharacterized protein.	0.500
mta1	RCOR1	ENSKMAP00000017565	ENSKMAP00000010512	Metastasis associated 1.	REST corepressor 1.	0.432
mta1	rcor2	ENSKMAP00000017565	ENSKMAP00000009251	Metastasis associated 1.	REST corepressor 2.	0.432
mta1	rcor3	ENSKMAP00000017565	ENSKMAP00000000326	Metastasis associated 1.	REST corepressor 3.	0.432
mta1	smarca5	ENSKMAP00000017565	ENSKMAP00000005047	Metastasis associated 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.458