8 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108245932	NEDD8 ubiquitin like modifier. (85 aa)
	ubb	Uncharacterized protein. (270 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (491 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	ubl4a	Ubiquitin like 4A. (155 aa)
	LOC108238649	NEDD8 ubiquitin like modifier. (90 aa)
	ubfd1	Ubiquitin family domain containing 1. (329 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108238649	rps27a	ENSKMAP00000027449	ENSKMAP00000004139	NEDD8 ubiquitin like modifier.	Ribosomal protein S27a.	0.943
LOC108238649	uba52	ENSKMAP00000027449	ENSKMAP00000006381	NEDD8 ubiquitin like modifier.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.954
LOC108238649	ubb	ENSKMAP00000027449	ENSKMAP00000016559	NEDD8 ubiquitin like modifier.	Uncharacterized protein.	0.886
LOC108238649	ubfd1	ENSKMAP00000027449	ENSKMAP00000025881	NEDD8 ubiquitin like modifier.	Ubiquitin family domain containing 1.	0.601
LOC108238649	ubl4a	ENSKMAP00000027449	ENSKMAP00000008275	NEDD8 ubiquitin like modifier.	Ubiquitin like 4A.	0.592
LOC108238649	usp14	ENSKMAP00000027449	ENSKMAP00000005090	NEDD8 ubiquitin like modifier.	Ubiquitin carboxyl-terminal hydrolase.	0.669
LOC108245932	rps27a	ENSKMAP00000016268	ENSKMAP00000004139	NEDD8 ubiquitin like modifier.	Ribosomal protein S27a.	0.909
LOC108245932	uba52	ENSKMAP00000016268	ENSKMAP00000006381	NEDD8 ubiquitin like modifier.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.932
LOC108245932	ubb	ENSKMAP00000016268	ENSKMAP00000016559	NEDD8 ubiquitin like modifier.	Uncharacterized protein.	0.833
LOC108245932	ubfd1	ENSKMAP00000016268	ENSKMAP00000025881	NEDD8 ubiquitin like modifier.	Ubiquitin family domain containing 1.	0.601
LOC108245932	ubl4a	ENSKMAP00000016268	ENSKMAP00000008275	NEDD8 ubiquitin like modifier.	Ubiquitin like 4A.	0.575
LOC108245932	usp14	ENSKMAP00000016268	ENSKMAP00000005090	NEDD8 ubiquitin like modifier.	Ubiquitin carboxyl-terminal hydrolase.	0.669
rps27a	LOC108238649	ENSKMAP00000004139	ENSKMAP00000027449	Ribosomal protein S27a.	NEDD8 ubiquitin like modifier.	0.943
rps27a	LOC108245932	ENSKMAP00000004139	ENSKMAP00000016268	Ribosomal protein S27a.	NEDD8 ubiquitin like modifier.	0.909
rps27a	uba52	ENSKMAP00000004139	ENSKMAP00000006381	Ribosomal protein S27a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
rps27a	ubb	ENSKMAP00000004139	ENSKMAP00000016559	Ribosomal protein S27a.	Uncharacterized protein.	0.995
rps27a	ubfd1	ENSKMAP00000004139	ENSKMAP00000025881	Ribosomal protein S27a.	Ubiquitin family domain containing 1.	0.891
rps27a	ubl4a	ENSKMAP00000004139	ENSKMAP00000008275	Ribosomal protein S27a.	Ubiquitin like 4A.	0.789
rps27a	usp14	ENSKMAP00000004139	ENSKMAP00000005090	Ribosomal protein S27a.	Ubiquitin carboxyl-terminal hydrolase.	0.969
uba52	LOC108238649	ENSKMAP00000006381	ENSKMAP00000027449	Ubiquitin A-52 residue ribosomal protein fusion product 1.	NEDD8 ubiquitin like modifier.	0.954