STRINGSTRING
ccnq ccnq cdk9 cdk9 LOC108231946 LOC108231946 kxd1 kxd1 men1 men1 rnf111 rnf111 PARD3 PARD3 LOC108235010 LOC108235010 LOC108228916 LOC108228916 LOC108245250 LOC108245250 cdk8 cdk8 LOC108228577 LOC108228577 LOC108242980 LOC108242980 LTBP3 LTBP3 ENSKMAP00000012734 ENSKMAP00000012734 LOC108247541 LOC108247541 itgb6 itgb6 LOC108228999 LOC108228999 LOC108250564 LOC108250564 meis2 meis2 LOC108241648 LOC108241648 strap strap parp1 parp1 LOC108237917 LOC108237917 LOC108236077 LOC108236077 sp1 sp1 LOC108245932 LOC108245932 LOC108235488 LOC108235488 ncor1 ncor1 ubb ubb LOC108230274 LOC108230274 TGFBR2 TGFBR2 LOC108236134 LOC108236134 LOC108248259 LOC108248259 stub1 stub1 ENSKMAP00000017834 ENSKMAP00000017834 ENSKMAP00000017863 ENSKMAP00000017863 ccnt1 ccnt1 ENSKMAP00000018362 ENSKMAP00000018362 ltbp1 ltbp1 ENSKMAP00000018430 ENSKMAP00000018430 ENSKMAP00000018456 ENSKMAP00000018456 LOC108242427 LOC108242427 nedd4l nedd4l cdk19 cdk19 ENSKMAP00000019655 ENSKMAP00000019655 ccnc ccnc smad2 smad2 cbl cbl bambi bambi meis1 meis1 LOC108243630 LOC108243630 LOC108236247 LOC108236247 SMURF2 SMURF2 irx3 irx3 irx5 irx5 irx6 irx6 LOC108250121 LOC108250121 LOC108246115 LOC108246115 LOC108238556 LOC108238556 LOC108247742 LOC108247742 LOC108238085 LOC108238085 ENSKMAP00000024402 ENSKMAP00000024402 ccnt2 ccnt2 rbl1 rbl1 LOC108248812 LOC108248812 zfyve9 zfyve9 smad3 smad3 LOC108232226 LOC108232226 ncor2 ncor2 irx2 irx2 LOC108232200 LOC108232200 LOC108246713 LOC108246713 LOC108247801 LOC108247801 LOC108238649 LOC108238649 LOC108243758 LOC108243758 SMAD4 SMAD4 e2f4 e2f4 pard3 pard3 LOC108236308 LOC108236308 skil skil LOC108230618 LOC108230618 LOC108230620 LOC108230620 LOC108231119 LOC108231119 usp9x usp9x trim33 trim33 uba52 uba52 LOC108250376 LOC108250376 mapk1 mapk1 LOC108231423 LOC108231423 snw1 snw1 rps27a rps27a ccnk ccnk itgb5 itgb5 cgn cgn LOC108237617 LOC108237617 furin furin tgfb3 tgfb3 ltbp2 ltbp2 fkbp1b fkbp1b itgb8 itgb8 LOC108230599 LOC108230599 LOC108250860 LOC108250860 LOC108238719 LOC108238719 LOC108238717 LOC108238717 LOC108239820 LOC108239820 ski ski tfdp1 tfdp1 ENSKMAP00000000371 ENSKMAP00000000371 ENSKMAP00000000323 ENSKMAP00000000323 ldlrad4 ldlrad4 atp1b4 atp1b4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccnqCyclin Q; Belongs to the cyclin family. (257 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
LOC108231946Peptidylprolyl isomerase. (109 aa)
kxd1KxDL motif containing 1. (185 aa)
men1Multiple endocrine neoplasia I. (628 aa)
rnf111Ring finger protein 111. (1023 aa)
PARD3Par-3 family cell polarity regulator. (1366 aa)
LOC108235010Mothers against decapentaplegic homolog. (467 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC108245250F11 receptor, tandem duplicate 1. (266 aa)
cdk8Cyclin-dependent kinase 8; Belongs to the protein kinase superfamily. (464 aa)
LOC108228577Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (822 aa)
LOC108242980Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (408 aa)
LTBP3Latent transforming growth factor beta binding protein 3. (1234 aa)
ENSKMAP00000012734Homeobox_KN domain-containing protein. (64 aa)
LOC108247541Mothers against decapentaplegic homolog. (503 aa)
itgb6Integrin beta; Belongs to the integrin beta chain family. (777 aa)
LOC108228999Mothers against decapentaplegic homolog. (553 aa)
LOC108250564Protein kinase C, zeta; Belongs to the protein kinase superfamily. (337 aa)
meis2Meis homeobox 2a. (469 aa)
LOC108241648Cingulin b. (1309 aa)
strapSerine/threonine kinase receptor associated protein. (329 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
LOC108237917Mothers against decapentaplegic homolog. (425 aa)
LOC108236077JunB proto-oncogene, AP-1 transcription factor subunit b. (306 aa)
sp1Sp1 transcription factor. (702 aa)
LOC108245932NEDD8 ubiquitin like modifier. (85 aa)
LOC108235488Cbl proto-oncogene C, E3 ubiquitin protein ligase. (570 aa)
ncor1Nuclear receptor corepressor 1. (2321 aa)
ubbUncharacterized protein. (270 aa)
LOC108230274TGFB-induced factor homeobox 1. (281 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (555 aa)
LOC108236134E3 ubiquitin-protein ligase. (770 aa)
LOC108248259Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (504 aa)
stub1STIP1 homology and U-Box containing protein 1. (284 aa)
ENSKMAP00000017834CYCLIN domain-containing protein; Belongs to the cyclin family. (186 aa)
ENSKMAP00000017863Cyclin T2b. (410 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (699 aa)
ENSKMAP00000018362Uncharacterized protein. (1291 aa)
ltbp1Latent transforming growth factor beta binding protein 1. (1389 aa)
ENSKMAP00000018430Uncharacterized protein. (207 aa)
ENSKMAP00000018456Uncharacterized protein. (232 aa)
LOC108242427Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
nedd4lNEDD4 like E3 ubiquitin protein ligase. (1223 aa)
cdk19Cyclin-dependent kinase 19; Belongs to the protein kinase superfamily. (493 aa)
ENSKMAP00000019655Mothers against decapentaplegic homolog. (340 aa)
ccncCyclin C; Belongs to the cyclin family. (283 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
cblCbl proto-oncogene, E3 ubiquitin protein ligase. (950 aa)
bambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (255 aa)
meis1Meis homeobox 1 b. (411 aa)
LOC108243630Uncharacterized protein. (317 aa)
LOC108236247E3 ubiquitin-protein ligase. (735 aa)
SMURF2E3 ubiquitin-protein ligase. (775 aa)
irx3Iroquois homeobox 3a. (432 aa)
irx5Iroquois homeobox 5a. (456 aa)
irx6Iroquois homeobox 6a. (508 aa)
LOC108250121Homeobox domain-containing protein. (388 aa)
LOC108246115Peptidylprolyl isomerase. (108 aa)
LOC108238556Par-3 family cell polarity regulator beta b. (1204 aa)
LOC108247742TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (586 aa)
LOC108238085Uncharacterized protein. (881 aa)
ENSKMAP00000024402Mohawk homeobox a. (298 aa)
ccnt2Cyclin T2; Belongs to the cyclin family. (718 aa)
rbl1Retinoblastoma-like 1 (p107). (1034 aa)
LOC108248812Integrin beta; Belongs to the integrin beta chain family. (797 aa)
zfyve9Zinc finger, FYVE domain containing 9a. (1195 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
LOC108232226Iroquois homeobox 4a. (484 aa)
ncor2Nuclear receptor corepressor 2. (1795 aa)
irx2Iroquois homeobox 2a. (523 aa)
LOC108232200Iroquois homeobox 1a. (490 aa)
LOC108246713Uncharacterized protein. (1229 aa)
LOC108247801TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (557 aa)
LOC108238649NEDD8 ubiquitin like modifier. (90 aa)
LOC108243758Integrin beta; Belongs to the integrin beta chain family. (806 aa)
SMAD4Mothers against decapentaplegic homolog. (457 aa)
e2f4E2F transcription factor 4. (388 aa)
pard3Par-3 family cell polarity regulator alpha, b. (1383 aa)
LOC108236308JunB proto-oncogene, AP-1 transcription factor subunit a. (331 aa)
skilSKI-like proto-oncogene a. (765 aa)
LOC108230618Fibrillin 2b. (2813 aa)
LOC108230620Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1053 aa)
LOC108231119V-ski avian sarcoma viral oncogene homolog b. (689 aa)
usp9xUbiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2514 aa)
trim33Tripartite motif containing 33. (1186 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC108250376Myeloid ecotropic viral integration site 3. (419 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
LOC108231423Transforming growth factor beta; Belongs to the TGF-beta family. (419 aa)
snw1SNW domain containing 1. (537 aa)
rps27aRibosomal protein S27a. (156 aa)
ccnkCyclin K; Belongs to the cyclin family. (542 aa)
itgb5Integrin beta; Belongs to the integrin beta chain family. (797 aa)
cgnCingulin a. (1205 aa)
LOC108237617Homeobox domain-containing protein. (310 aa)
furinFurin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (840 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
ltbp2Uncharacterized protein. (1700 aa)
fkbp1bPeptidylprolyl isomerase. (108 aa)
itgb8Integrin beta. (409 aa)
LOC108230599Si:dkey-235d18.5. (824 aa)
LOC108250860Uncharacterized protein. (395 aa)
LOC108238719Homeobox domain-containing protein. (407 aa)
LOC108238717Iroquois homeobox 1b. (443 aa)
LOC108239820Homeobox domain-containing protein. (590 aa)
skiV-ski avian sarcoma viral oncogene homolog a. (719 aa)
tfdp1Transcription factor. (412 aa)
ENSKMAP00000000371E2F transcription factor 5. (163 aa)
ENSKMAP00000000323E2F_TDP domain-containing protein. (85 aa)
ldlrad4Low density lipoprotein receptor class A domain containing 4b. (264 aa)
atp1b4Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (338 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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