STRINGSTRING
skp1 skp1 FBXO43 FBXO43 ENSKMAP00000001164 ENSKMAP00000001164 rps27a rps27a ubb ubb uba52 uba52 kxd1 kxd1 LOC108238293 LOC108238293 FZR1 FZR1 cdc20 cdc20 cul1 cul1 fbxo5 fbxo5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
FBXO43F-box protein 43. (616 aa)
ENSKMAP00000001164Uncharacterized protein. (866 aa)
rps27aRibosomal protein S27a. (156 aa)
ubbUncharacterized protein. (270 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
kxd1KxDL motif containing 1. (185 aa)
LOC108238293Fizzy/cell division cycle 20 related 1b. (487 aa)
FZR1Fizzy/cell division cycle 20 related 1a. (496 aa)
cdc20Cell division cycle 20 homolog. (499 aa)
cul1Cullin 1b; Belongs to the cullin family. (776 aa)
fbxo5F-box protein 5. (438 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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