13 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sqstm1	Sequestosome 1. (430 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (573 aa)
	LOC108231757	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (306 aa)
	ENSKMAP00000027218	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (208 aa)
	LOC108249417	Nerve growth factor receptor b. (427 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (743 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (317 aa)
	LOC108237797	Nerve growth factor receptor a (TNFR superfamily, member 16). (352 aa)
	LOC108228236	Protein kinase domain-containing protein. (672 aa)
	ubb	Uncharacterized protein. (270 aa)
	LOC108231487	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (195 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000027218	LOC108228236	ENSKMAP00000027218	ENSKMAP00000015333	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Protein kinase domain-containing protein.	0.484
ENSKMAP00000027218	LOC108231757	ENSKMAP00000027218	ENSKMAP00000004898	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.423
ENSKMAP00000027218	LOC108237797	ENSKMAP00000027218	ENSKMAP00000012813	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.986
ENSKMAP00000027218	LOC108249417	ENSKMAP00000027218	ENSKMAP00000028085	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Nerve growth factor receptor b.	0.795
ENSKMAP00000027218	nfkbia	ENSKMAP00000027218	ENSKMAP00000011039	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.423
ENSKMAP00000027218	sqstm1	ENSKMAP00000027218	ENSKMAP00000024409	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Sequestosome 1.	0.486
ENSKMAP00000027218	traf6	ENSKMAP00000027218	ENSKMAP00000004164	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.516
LOC108228236	ENSKMAP00000027218	ENSKMAP00000015333	ENSKMAP00000027218	Protein kinase domain-containing protein.	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	0.484
LOC108228236	LOC108231757	ENSKMAP00000015333	ENSKMAP00000004898	Protein kinase domain-containing protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.553
LOC108228236	LOC108237797	ENSKMAP00000015333	ENSKMAP00000012813	Protein kinase domain-containing protein.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.741
LOC108228236	ikbkb	ENSKMAP00000015333	ENSKMAP00000005245	Protein kinase domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.670
LOC108228236	nfkbia	ENSKMAP00000015333	ENSKMAP00000011039	Protein kinase domain-containing protein.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.553
LOC108228236	rps27a	ENSKMAP00000015333	ENSKMAP00000004139	Protein kinase domain-containing protein.	Ribosomal protein S27a.	0.661
LOC108228236	sqstm1	ENSKMAP00000015333	ENSKMAP00000024409	Protein kinase domain-containing protein.	Sequestosome 1.	0.809
LOC108228236	traf6	ENSKMAP00000015333	ENSKMAP00000004164	Protein kinase domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.996
LOC108228236	uba52	ENSKMAP00000015333	ENSKMAP00000006381	Protein kinase domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.646
LOC108228236	ubb	ENSKMAP00000015333	ENSKMAP00000016559	Protein kinase domain-containing protein.	Uncharacterized protein.	0.659
LOC108231487	LOC108237797	ENSKMAP00000020886	ENSKMAP00000012813	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.931
LOC108231487	LOC108249417	ENSKMAP00000020886	ENSKMAP00000028085	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.	Nerve growth factor receptor b.	0.957
LOC108231757	ENSKMAP00000027218	ENSKMAP00000004898	ENSKMAP00000027218	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	0.423