STRINGSTRING
ENSKMAP00000012922 ENSKMAP00000012922 LOC108233456 LOC108233456 gsk3b gsk3b suz12 suz12 LOC108247910 LOC108247910 ENSKMAP00000028753 ENSKMAP00000028753 LOC108249072 LOC108249072 ddx21 ddx21 LOC108247324 LOC108247324 LOC108247325 LOC108247325 tbp tbp ENSKMAP00000027340 ENSKMAP00000027340 ENSKMAP00000027305 ENSKMAP00000027305 ercc6 ercc6 kat2a kat2a ENSKMAP00000026427 ENSKMAP00000026427 EZH1 EZH1 Mybbp1a Mybbp1a taf1a taf1a ezh2 ezh2 dnmt1 dnmt1 ENSKMAP00000022629 ENSKMAP00000022629 ENSKMAP00000022580 ENSKMAP00000022580 ENSKMAP00000022564 ENSKMAP00000022564 myo1b myo1b LOC108248915 LOC108248915 polr1b polr1b actb actb ENSKMAP00000021156 ENSKMAP00000021156 ENSKMAP00000021154 ENSKMAP00000021154 ep300 ep300 myo1c myo1c LOC108251254 LOC108251254 LOC108232401 LOC108232401 LOC108245988 LOC108245988 sap130 sap130 polr1c polr1c ENSKMAP00000019155 ENSKMAP00000019155 polr2f polr2f LOC108239071 LOC108239071 LOC108243116 LOC108243116 dnmt3a dnmt3a BAZ2B BAZ2B ENSKMAP00000018069 ENSKMAP00000018069 LOC108228304 LOC108228304 LOC108247604 LOC108247604 baz2a baz2a LOC108237907 LOC108237907 LOC108245856 LOC108245856 LOC108250610 LOC108250610 LOC108245850 LOC108245850 LOC108249892 LOC108249892 LOC108237764 LOC108237764 gsk3a gsk3a ENSKMAP00000013110 ENSKMAP00000013110 LOC108229777 LOC108229777 rrp8 rrp8 ENSKMAP00000011726 ENSKMAP00000011726 LOC108244554 LOC108244554 tet3 tet3 sirt1 sirt1 polr2h polr2h LOC108229693 LOC108229693 ENSKMAP00000010962 ENSKMAP00000010962 ENSKMAP00000010784 ENSKMAP00000010784 ENSKMAP00000010652 ENSKMAP00000010652 LOC108247233 LOC108247233 LOC108239717 LOC108239717 taf1c taf1c polr1a polr1a jarid2 jarid2 LOC108240031 LOC108240031 LOC108240030 LOC108240030 ENSKMAP00000009348 ENSKMAP00000009348 LOC108250440 LOC108250440 LOC108245718 LOC108245718 tdg tdg POLR2E POLR2E H2AZ1 H2AZ1 phf19 phf19 LOC108232083 LOC108232083 LOC112450151 LOC112450151 MYO1D MYO1D ENSKMAP00000006891 ENSKMAP00000006891 kat2b kat2b ENSKMAP00000006625 ENSKMAP00000006625 ENSKMAP00000006394 ENSKMAP00000006394 LOC108241661 LOC108241661 LOC108244348 LOC108244348 ENSKMAP00000005396 ENSKMAP00000005396 sf3b1 sf3b1 smarca5 smarca5 LOC108229423 LOC108229423 polr2l polr2l eed eed taf1b taf1b ENSKMAP00000003646 ENSKMAP00000003646 AEBP2 AEBP2 sap30bp sap30bp baz1b baz1b LOC108242801 LOC108242801 H3-3B H3-3B mtf2 mtf2 twistnb twistnb ENSKMAP00000001977 ENSKMAP00000001977 ENSKMAP00000001920 ENSKMAP00000001920 znrd1 znrd1 tet2 tet2 polr1e polr1e
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSKMAP00000012922Histone H2B; Belongs to the histone H2B family. (155 aa)
LOC108233456DNA (cytosine-5-)-methyltransferase 3 alpha a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (843 aa)
gsk3bGlycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (421 aa)
suz12SUZ12 polycomb repressive complex 2 subunit b. (693 aa)
LOC108247910Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (998 aa)
ENSKMAP00000028753Histone H2A; Belongs to the histone H2A family. (124 aa)
LOC108249072AE binding protein 2. (274 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (754 aa)
LOC108247324Histone domain-containing protein. (153 aa)
LOC108247325Histone H3.3. (136 aa)
tbpTATA box binding protein. (304 aa)
ENSKMAP00000027340PHD-type domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (592 aa)
ENSKMAP00000027305PWWP domain-containing protein. (61 aa)
ercc6Excision repair cross-complementation group 6. (1442 aa)
kat2aHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (797 aa)
ENSKMAP00000026427Histone domain-containing protein. (134 aa)
EZH1Enhancer of zeste 1 polycomb repressive complex 2 subunit. (765 aa)
Mybbp1aUncharacterized protein. (473 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (433 aa)
ezh2Enhancer of zeste 2 polycomb repressive complex 2 subunit. (759 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1507 aa)
ENSKMAP00000022629Histone domain-containing protein. (97 aa)
ENSKMAP00000022580Histone H3; Belongs to the histone H3 family. (127 aa)
ENSKMAP00000022564Histone H2B; Belongs to the histone H2B family. (168 aa)
myo1bMyosin IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1166 aa)
LOC108248915DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
actbUncharacterized protein. (375 aa)
ENSKMAP00000021156Histone domain-containing protein. (123 aa)
ENSKMAP00000021154Uncharacterized protein. (91 aa)
ep300E1A binding protein p300 b. (2785 aa)
myo1cMyosin Ic, paralog b; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1064 aa)
LOC108251254CD3e molecule, epsilon associated protein. (332 aa)
LOC108232401Retinoblastoma binding protein 4. (424 aa)
LOC108245988PHD finger protein 1. (539 aa)
sap130Sin3A-associated protein a. (1047 aa)
polr1cRNA polymerase I and III subunit C. (361 aa)
ENSKMAP00000019155Histone H2A; Belongs to the histone H2A family. (137 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC108239071Histone H3; Belongs to the histone H3 family. (142 aa)
LOC108243116Histone H3.3. (136 aa)
dnmt3aDNA (cytosine-5-)-methyltransferase 3 alpha b; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (985 aa)
BAZ2BBromodomain adjacent to zinc finger domain 2B. (2154 aa)
ENSKMAP00000018069Histone H2B; Belongs to the histone H2B family. (151 aa)
LOC108228304TATA box binding protein like 2. (310 aa)
LOC108247604Myosin Ic, paralog a; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1045 aa)
baz2aBromodomain adjacent to zinc finger domain, 2A. (2703 aa)
LOC108237907Retinoblastoma binding protein 4, like. (440 aa)
LOC108245856Histone H2B; Belongs to the histone H2B family. (124 aa)
LOC108250610DEK proto-oncogene. (328 aa)
LOC108245850Uncharacterized protein. (375 aa)
LOC108249892Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
LOC108237764Histone domain-containing protein. (123 aa)
gsk3aGlycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
ENSKMAP00000013110Histone domain-containing protein. (113 aa)
LOC108229777Histone H4. (103 aa)
rrp8Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (555 aa)
ENSKMAP00000011726Histone H2A; Belongs to the histone H2A family. (134 aa)
LOC108244554Uncharacterized protein. (375 aa)
tet3Tet methylcytosine dioxygenase 3. (1972 aa)
sirt1Sirtuin 1. (693 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC108229693VEFS-Box domain-containing protein. (613 aa)
ENSKMAP00000010962Histone H2A; Belongs to the histone H2A family. (134 aa)
ENSKMAP00000010784annotation not available (146 aa)
ENSKMAP00000010652Histone H2A; Belongs to the histone H2A family. (146 aa)
LOC108247233Histone H4. (103 aa)
LOC108239717Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
taf1cWu:fj64h06. (975 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1678 aa)
jarid2Jumonji, AT rich interactive domain 2b. (1445 aa)
LOC108240031Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC108240030Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSKMAP00000009348Histone H2A; Belongs to the histone H2A family. (135 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
LOC108245718Thymine DNA glycosylase, tandem duplicate 2. (387 aa)
tdgThymine DNA glycosylase, tandem duplicate 1. (444 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
phf19PHD finger protein 19. (560 aa)
LOC108232083DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1476 aa)
LOC112450151Uncharacterized protein. (205 aa)
MYO1DMyosin ID; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1004 aa)
ENSKMAP00000006891Histone domain-containing protein. (104 aa)
kat2bHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (792 aa)
ENSKMAP00000006625Histone domain-containing protein. (132 aa)
ENSKMAP00000006394Histone domain-containing protein. (99 aa)
LOC108241661Histone H2B; Belongs to the histone H2B family. (116 aa)
LOC108244348Tet methylcytosine dioxygenase 1. (2150 aa)
ENSKMAP00000005396Histone domain-containing protein. (158 aa)
sf3b1Splicing factor 3b, subunit 1. (1318 aa)
smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1035 aa)
LOC108229423Histone H2B; Belongs to the histone H2B family. (124 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
eedEmbryonic ectoderm development. (439 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (515 aa)
ENSKMAP00000003646Uncharacterized protein; Belongs to the histone H2B family. (148 aa)
AEBP2AE binding protein 2. (466 aa)
sap30bpSAP30 binding protein. (308 aa)
baz1bBromodomain adjacent to zinc finger domain, 1B. (1588 aa)
LOC108242801Histone H2A; Belongs to the histone H2A family. (132 aa)
H3-3BHistone H3; Belongs to the histone H3 family. (136 aa)
mtf2Metal response element binding transcription factor 2. (623 aa)
twistnbTWIST neighbor. (370 aa)
ENSKMAP00000001977MBD domain-containing protein. (579 aa)
ENSKMAP00000001920Uncharacterized protein. (457 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (119 aa)
tet2Tet methylcytosine dioxygenase 2. (1804 aa)
polr1eRNA polymerase I subunit E. (416 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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