STRINGSTRING
LOC108230620 LOC108230620 LOC108247742 LOC108247742 LOC108250564 LOC108250564 LOC108241648 LOC108241648 ubb ubb TGFBR2 TGFBR2 LOC108248259 LOC108248259 LOC108245250 LOC108245250 LOC108228916 LOC108228916 PARD3 PARD3 uba52 uba52 rps27a rps27a cgn cgn LOC108250860 LOC108250860 LOC108246713 LOC108246713 LOC108247801 LOC108247801 pard3 pard3 LOC108238556 LOC108238556
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108230620Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1053 aa)
LOC108247742TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (586 aa)
LOC108250564Protein kinase C, zeta; Belongs to the protein kinase superfamily. (337 aa)
LOC108241648Cingulin b. (1309 aa)
ubbUncharacterized protein. (270 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (555 aa)
LOC108248259Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (504 aa)
LOC108245250F11 receptor, tandem duplicate 1. (266 aa)
LOC108228916Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
PARD3Par-3 family cell polarity regulator. (1366 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
rps27aRibosomal protein S27a. (156 aa)
cgnCingulin a. (1205 aa)
LOC108250860Uncharacterized protein. (395 aa)
LOC108246713Uncharacterized protein. (1229 aa)
LOC108247801TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (557 aa)
pard3Par-3 family cell polarity regulator alpha, b. (1383 aa)
LOC108238556Par-3 family cell polarity regulator beta b. (1204 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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