64 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snw1	SNW domain containing 1. (537 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	ccnk	Cyclin K; Belongs to the cyclin family. (542 aa)
	LOC108237617	Homeobox domain-containing protein. (310 aa)
	furin	Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (840 aa)
	LOC108238719	Homeobox domain-containing protein. (407 aa)
	LOC108238717	Iroquois homeobox 1b. (443 aa)
	LOC108239820	Homeobox domain-containing protein. (590 aa)
	ski	V-ski avian sarcoma viral oncogene homolog a. (719 aa)
	tfdp1	Transcription factor. (412 aa)
	ENSKMAP00000000371	E2F transcription factor 5. (163 aa)
	ENSKMAP00000000323	E2F_TDP domain-containing protein. (85 aa)
	atp1b4	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (338 aa)
	ccnt2	Cyclin T2; Belongs to the cyclin family. (718 aa)
	ENSKMAP00000024402	Mohawk homeobox a. (298 aa)
	LOC108250121	Homeobox domain-containing protein. (388 aa)
	irx6	Iroquois homeobox 6a. (508 aa)
	irx5	Iroquois homeobox 5a. (456 aa)
	irx3	Iroquois homeobox 3a. (432 aa)
	meis1	Meis homeobox 1 b. (411 aa)
	smad2	Mothers against decapentaplegic homolog. (474 aa)
	ccnc	Cyclin C; Belongs to the cyclin family. (283 aa)
	rbl1	Retinoblastoma-like 1 (p107). (1034 aa)
	ENSKMAP00000019655	Mothers against decapentaplegic homolog. (340 aa)
	cdk19	Cyclin-dependent kinase 19; Belongs to the protein kinase superfamily. (493 aa)
	nedd4l	NEDD4 like E3 ubiquitin protein ligase. (1223 aa)
	ccnt1	Cyclin T1; Belongs to the cyclin family. (699 aa)
	ENSKMAP00000017863	Cyclin T2b. (410 aa)
	ENSKMAP00000017834	CYCLIN domain-containing protein; Belongs to the cyclin family. (186 aa)
	LOC108230274	TGFB-induced factor homeobox 1. (281 aa)
	ubb	Uncharacterized protein. (270 aa)
	ncor1	Nuclear receptor corepressor 1. (2321 aa)
	sp1	Sp1 transcription factor. (702 aa)
	LOC108236077	JunB proto-oncogene, AP-1 transcription factor subunit b. (306 aa)
	LOC108237917	Mothers against decapentaplegic homolog. (425 aa)
	parp1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
	meis2	Meis homeobox 2a. (469 aa)
	LOC108228999	Mothers against decapentaplegic homolog. (553 aa)
	smad3	Mothers against decapentaplegic homolog. (425 aa)
	LOC108247541	Mothers against decapentaplegic homolog. (503 aa)
	ENSKMAP00000012734	Homeobox_KN domain-containing protein. (64 aa)
	LOC108242980	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (408 aa)
	LOC108228577	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (822 aa)
	cdk8	Cyclin-dependent kinase 8; Belongs to the protein kinase superfamily. (464 aa)
	LOC108235010	Mothers against decapentaplegic homolog. (467 aa)
	skil	SKI-like proto-oncogene a. (765 aa)
	LOC108236308	JunB proto-oncogene, AP-1 transcription factor subunit a. (331 aa)
	e2f4	E2F transcription factor 4. (388 aa)
	SMAD4	Mothers against decapentaplegic homolog. (457 aa)
	LOC108232200	Iroquois homeobox 1a. (490 aa)
	irx2	Iroquois homeobox 2a. (523 aa)
	ncor2	Nuclear receptor corepressor 2. (1795 aa)
	LOC108232226	Iroquois homeobox 4a. (484 aa)
	rnf111	Ring finger protein 111. (1023 aa)
	men1	Multiple endocrine neoplasia I. (628 aa)
	kxd1	KxDL motif containing 1. (185 aa)
	cdk9	Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
	ccnq	Cyclin Q; Belongs to the cyclin family. (257 aa)
	LOC108231119	V-ski avian sarcoma viral oncogene homolog b. (689 aa)
	usp9x	Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2514 aa)
	trim33	Tripartite motif containing 33. (1186 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC108250376	Myeloid ecotropic viral integration site 3. (419 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000000323	LOC108228999	ENSKMAP00000000323	ENSKMAP00000014115	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.542
ENSKMAP00000000323	LOC108235010	ENSKMAP00000000323	ENSKMAP00000010723	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.940
ENSKMAP00000000323	LOC108237917	ENSKMAP00000000323	ENSKMAP00000015782	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.940
ENSKMAP00000000323	LOC108247541	ENSKMAP00000000323	ENSKMAP00000013171	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.952
ENSKMAP00000000323	SMAD4	ENSKMAP00000000323	ENSKMAP00000028560	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.542
ENSKMAP00000000323	e2f4	ENSKMAP00000000323	ENSKMAP00000029019	E2F_TDP domain-containing protein.	E2F transcription factor 4.	0.901
ENSKMAP00000000323	rbl1	ENSKMAP00000000323	ENSKMAP00000025337	E2F_TDP domain-containing protein.	Retinoblastoma-like 1 (p107).	0.985
ENSKMAP00000000323	smad2	ENSKMAP00000000323	ENSKMAP00000020198	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.426
ENSKMAP00000000323	smad3	ENSKMAP00000000323	ENSKMAP00000026576	E2F_TDP domain-containing protein.	Mothers against decapentaplegic homolog.	0.940
ENSKMAP00000000323	tfdp1	ENSKMAP00000000323	ENSKMAP00000000828	E2F_TDP domain-containing protein.	Transcription factor.	0.988
ENSKMAP00000000371	LOC108228999	ENSKMAP00000000371	ENSKMAP00000014115	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.542
ENSKMAP00000000371	LOC108235010	ENSKMAP00000000371	ENSKMAP00000010723	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.426
ENSKMAP00000000371	LOC108237917	ENSKMAP00000000371	ENSKMAP00000015782	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.426
ENSKMAP00000000371	LOC108247541	ENSKMAP00000000371	ENSKMAP00000013171	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.542
ENSKMAP00000000371	SMAD4	ENSKMAP00000000371	ENSKMAP00000028560	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.542
ENSKMAP00000000371	rbl1	ENSKMAP00000000371	ENSKMAP00000025337	E2F transcription factor 5.	Retinoblastoma-like 1 (p107).	0.856
ENSKMAP00000000371	smad2	ENSKMAP00000000371	ENSKMAP00000020198	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.426
ENSKMAP00000000371	smad3	ENSKMAP00000000371	ENSKMAP00000026576	E2F transcription factor 5.	Mothers against decapentaplegic homolog.	0.426
ENSKMAP00000000371	tfdp1	ENSKMAP00000000371	ENSKMAP00000000828	E2F transcription factor 5.	Transcription factor.	0.926
ENSKMAP00000017834	ENSKMAP00000017863	ENSKMAP00000017834	ENSKMAP00000017863	CYCLIN domain-containing protein; Belongs to the cyclin family.	Cyclin T2b.	0.900