STRINGSTRING
LOC108237917 LOC108237917 atp1b4 atp1b4 ski ski LOC108239820 LOC108239820 rps27a rps27a snw1 snw1 mapk1 mapk1 uba52 uba52 trim33 trim33 usp9x usp9x LOC108231119 LOC108231119 LOC108235010 LOC108235010 LOC108242980 LOC108242980 LOC108247541 LOC108247541 LOC108228999 LOC108228999 parp1 parp1 ncor1 ncor1 ubb ubb LOC108230274 LOC108230274 nedd4l nedd4l smad2 smad2 smad3 smad3 ncor2 ncor2 SMAD4 SMAD4 skil skil
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108237917Mothers against decapentaplegic homolog. (425 aa)
atp1b4Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (338 aa)
skiV-ski avian sarcoma viral oncogene homolog a. (719 aa)
LOC108239820Homeobox domain-containing protein. (590 aa)
rps27aRibosomal protein S27a. (156 aa)
snw1SNW domain containing 1. (537 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
trim33Tripartite motif containing 33. (1186 aa)
usp9xUbiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2514 aa)
LOC108231119V-ski avian sarcoma viral oncogene homolog b. (689 aa)
LOC108235010Mothers against decapentaplegic homolog. (467 aa)
LOC108242980Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (408 aa)
LOC108247541Mothers against decapentaplegic homolog. (503 aa)
LOC108228999Mothers against decapentaplegic homolog. (553 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
ncor1Nuclear receptor corepressor 1. (2321 aa)
ubbUncharacterized protein. (270 aa)
LOC108230274TGFB-induced factor homeobox 1. (281 aa)
nedd4lNEDD4 like E3 ubiquitin protein ligase. (1223 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
ncor2Nuclear receptor corepressor 2. (1795 aa)
SMAD4Mothers against decapentaplegic homolog. (457 aa)
skilSKI-like proto-oncogene a. (765 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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