STRINGSTRING
ENSKMAP00000007722 ENSKMAP00000007722 tdg tdg LOC108236085 LOC108236085 blm blm LOC108237983 LOC108237983 LOC108228443 LOC108228443 LOC108236207 LOC108236207 smc6 smc6 bmi1 bmi1 nsmce4a nsmce4a pcgf2 pcgf2 LOC108228363 LOC108228363 nup210 nup210 RING1 RING1 SCML2 SCML2 tpr tpr nup37 nup37 scmh1 scmh1 LOC108250655 LOC108250655 LOC108240719 LOC108240719 LOC108247603 LOC108247603 ube2i ube2i LOC108232577 LOC108232577 rnf2 rnf2 parp1 parp1 aaas aaas LOC108234481 LOC108234481 rad52 rad52 nup35 nup35 ENSKMAP00000014889 ENSKMAP00000014889 nup133 nup133 nup188 nup188 nup160 nup160 nup155 nup155 recql4 recql4 LOC108239511 LOC108239511 mdc1 mdc1 xrcc4 xrcc4 nup98 nup98 CBX2 CBX2 LOC108236604 LOC108236604 smc5 smc5 ENSKMAP00000009313 ENSKMAP00000009313 cbx2 cbx2 LOC108245718 LOC108245718 RPA1 RPA1 seh1l seh1l nup107 nup107 LOC108240408 LOC108240408 LOC108242722 LOC108242722 RAD21 RAD21 xpc xpc stag1 stag1 pias4 pias4 LOC108249712 LOC108249712 sumo1 sumo1 ENSKMAP00000005692 ENSKMAP00000005692 smc1a smc1a rpa1 rpa1 nup58 nup58 rae1 rae1 nup43 nup43 nup93 nup93 nsmce2 nsmce2 LOC108232185 LOC108232185 sumo2 sumo2 nup85 nup85 nsmce1 nsmce1 LOC108241443 LOC108241443 cbx4 cbx4 smc3 smc3 LOC108239259 LOC108239259 LOC108239245 LOC108239245 LOC108238015 LOC108238015 LOC108228539 LOC108228539 ENSKMAP00000025647 ENSKMAP00000025647 nup42 nup42 cetn3 cetn3 brca1 brca1 LOC108236174 LOC108236174
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSKMAP00000007722RAD21 cohesin complex component like 1. (496 aa)
tdgThymine DNA glycosylase, tandem duplicate 1. (444 aa)
LOC108236085Uncharacterized protein. (613 aa)
blmBLM RecQ like helicase. (1384 aa)
LOC108237983Stromal antigen 2b. (1272 aa)
LOC108228443Chromobox homolog 8b. (345 aa)
LOC108236207UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
smc6Structural maintenance of chromosomes 6. (1092 aa)
bmi1Bmi1 polycomb ring finger oncogene 1a. (346 aa)
nsmce4aNon-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (351 aa)
pcgf2Polycomb group ring finger 2. (376 aa)
LOC108228363Nucleoporin 50. (312 aa)
nup210Nucleoporin 210. (1882 aa)
RING1Ring finger protein 1. (406 aa)
SCML2Scm polycomb group protein like 2. (700 aa)
tprTranslocated promoter region b, nuclear basket protein. (2200 aa)
nup37Nucleoporin 37. (326 aa)
scmh1SAM domain-containing protein. (723 aa)
LOC108250655Potassium channel tetramerization domain containing 2. (265 aa)
LOC108240719Small ubiquitin-related modifier. (94 aa)
LOC108247603Stromal antigen 2a. (1274 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
LOC108232577Small ubiquitin-related modifier. (94 aa)
rnf2Ring finger protein 2. (342 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (518 aa)
LOC108234481Uncharacterized protein. (270 aa)
rad52RAD52 homolog, DNA repair protein. (382 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (297 aa)
ENSKMAP00000014889Si:dkey-119f1.1. (1095 aa)
nup133Nucleoporin 133. (1138 aa)
nup188Nucleoporin 188. (1712 aa)
nup160Nucleoporin 160. (1399 aa)
nup155Nucleoporin 155. (1367 aa)
recql4RecQ helicase-like 4. (1281 aa)
LOC108239511Translocated promoter region a, nuclear basket protein. (2040 aa)
mdc1Uncharacterized protein. (1989 aa)
xrcc4X-ray repair complementing defective repair in Chinese hamster cells 4. (343 aa)
nup98Nucleoporin 98. (1811 aa)
CBX2Chromobox 2. (475 aa)
LOC108236604Centrin 4. (173 aa)
smc5Structural maintenance of chromosomes 5. (1078 aa)
ENSKMAP00000009313Methionine sulfoxide reductase B1b. (467 aa)
cbx2Chromobox homolog 2 (Drosophila Pc class). (508 aa)
LOC108245718Thymine DNA glycosylase, tandem duplicate 2. (387 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
LOC108240408RAN binding protein 2. (3043 aa)
LOC108242722Small ubiquitin-related modifier. (96 aa)
RAD21RAD21 cohesin complex component. (642 aa)
xpcXeroderma pigmentosum, complementation group C. (935 aa)
stag1Stromal antigen 1a. (1259 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
LOC108249712Necdin-like 2. (261 aa)
sumo1Small ubiquitin-related modifier. (105 aa)
ENSKMAP00000005692Rad60-SLD domain-containing protein. (139 aa)
smc1aStructural maintenance of chromosomes protein. (1231 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
nup58Nucleoporin 58. (590 aa)
rae1Ribonucleic acid export 1. (368 aa)
nup43Nucleoporin 43. (371 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (821 aa)
nsmce2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (228 aa)
LOC108232185RAD21 cohesin complex component a. (636 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
nsmce1NSE1 homolog, SMC5-SMC6 complex component. (247 aa)
LOC108241443Calcyon neuron-specific vesicular protein. (205 aa)
cbx4Chromobox 4. (610 aa)
smc3Structural maintenance of chromosomes protein. (1218 aa)
LOC108239259Chromobox homolog 8a (Pc class homolog, Drosophila). (321 aa)
LOC108239245Chromobox homolog 4 (Pc class homolog, Drosophila). (549 aa)
LOC108238015POM121 transmembrane nucleoporin. (1163 aa)
LOC108228539SAM domain-containing protein. (611 aa)
ENSKMAP00000025647Uncharacterized protein. (183 aa)
nup42Nucleoporin 42. (436 aa)
cetn3Centrin 3. (172 aa)
brca1Uncharacterized protein. (1354 aa)
LOC108236174Uncharacterized protein. (450 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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