STRINGSTRING
HDAC3 HDAC3 rcor2 rcor2 ENSKMAP00000009348 ENSKMAP00000009348 LOC108240030 LOC108240030 brms1 brms1 RCOR1 RCOR1 LOC108235376 LOC108235376 ENSKMAP00000010652 ENSKMAP00000010652 brms1l brms1l ENSKMAP00000010784 ENSKMAP00000010784 ENSKMAP00000010962 ENSKMAP00000010962 ENSKMAP00000011726 ENSKMAP00000011726 ENSKMAP00000012922 ENSKMAP00000012922 kdm1a kdm1a hmg20a hmg20a arid4b arid4b mta3 mta3 LOC108245856 LOC108245856 LOC108237907 LOC108237907 mta1 mta1 PHF21B PHF21B hdac10 hdac10 HDAC1 HDAC1 ENSKMAP00000019155 ENSKMAP00000019155 LOC108232401 LOC108232401 wdr26 wdr26 ENSKMAP00000022147 ENSKMAP00000022147 LOC108247745 LOC108247745 chd5 chd5 ENSKMAP00000028753 ENSKMAP00000028753 phf21a phf21a ncor2 ncor2 chd3 chd3 LOC108242669 LOC108242669 arid4a arid4a rcor3 rcor3 sap18 sap18 gatad2b gatad2b LOC108238745 LOC108238745 suds3 suds3 sap30l sap30l LOC108229423 LOC108229423 hmg20b hmg20b LOC108231751 LOC108231751 LOC108241661 LOC108241661 hdac8 hdac8 gatad2a gatad2a LOC108239707 LOC108239707 LOC108239526 LOC108239526 mta2 mta2 rest rest
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (428 aa)
rcor2REST corepressor 2. (549 aa)
ENSKMAP00000009348Histone H2A; Belongs to the histone H2A family. (135 aa)
LOC108240030Histone H2B; Belongs to the histone H2B family. (124 aa)
brms1BRMS1 transcriptional repressor and anoikis regulator. (277 aa)
RCOR1REST corepressor 1. (392 aa)
LOC108235376Uncharacterized protein. (1969 aa)
ENSKMAP00000010652Histone H2A; Belongs to the histone H2A family. (146 aa)
brms1lUncharacterized protein. (251 aa)
ENSKMAP00000010784annotation not available (146 aa)
ENSKMAP00000010962Histone H2A; Belongs to the histone H2A family. (134 aa)
ENSKMAP00000011726Histone H2A; Belongs to the histone H2A family. (134 aa)
ENSKMAP00000012922Histone H2B; Belongs to the histone H2B family. (155 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (837 aa)
hmg20aHigh mobility group 20A. (291 aa)
arid4bTranslocase of outer mitochondrial membrane 20. (1106 aa)
mta3Metastasis associated 1 family, member 3. (700 aa)
LOC108245856Histone H2B; Belongs to the histone H2B family. (124 aa)
LOC108237907Retinoblastoma binding protein 4, like. (440 aa)
mta1Metastasis associated 1. (619 aa)
PHF21BPHD finger protein 21B. (329 aa)
hdac10Histone deacetylase 10. (663 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (488 aa)
ENSKMAP00000019155Histone H2A; Belongs to the histone H2A family. (137 aa)
LOC108232401Retinoblastoma binding protein 4. (424 aa)
wdr26WD repeat domain 26b. (608 aa)
ENSKMAP00000022147WD repeat domain 73. (385 aa)
LOC108247745Uncharacterized protein. (638 aa)
chd5Uncharacterized protein. (1779 aa)
ENSKMAP00000028753Histone H2A; Belongs to the histone H2A family. (124 aa)
phf21aPHD finger protein 21Ab. (554 aa)
ncor2Nuclear receptor corepressor 2. (1795 aa)
chd3Chromodomain helicase DNA binding protein 3. (1811 aa)
LOC108242669Chromodomain helicase DNA binding protein 4a. (1769 aa)
arid4aAT rich interactive domain 4A (RBP1-like). (1384 aa)
rcor3REST corepressor 3. (561 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
gatad2bGATA zinc finger domain containing 2B. (658 aa)
LOC108238745Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
suds3SDS3 homolog, SIN3A corepressor complex component. (352 aa)
sap30lSap30-like. (178 aa)
LOC108229423Histone H2B; Belongs to the histone H2B family. (124 aa)
hmg20bHigh mobility group 20B. (294 aa)
LOC108231751BRMS1 like transcriptional repressor b. (324 aa)
LOC108241661Histone H2B; Belongs to the histone H2B family. (116 aa)
hdac8Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (396 aa)
gatad2aGATA zinc finger domain containing 2Ab. (639 aa)
LOC108239707Transducin beta like 1 X-linked. (513 aa)
LOC108239526Uncharacterized protein. (749 aa)
mta2Metastasis associated 1 family, member 2. (665 aa)
restRE1-silencing transcription factor. (996 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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